DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMED5 and p24-2

DIOPT Version :10

Sequence 1:NP_057124.3 Gene:TMED5 / 50999 HGNCID:24251 Length:229 Species:Homo sapiens
Sequence 2:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster


Alignment Length:201 Identity:42/201 - (20%)
Similarity:84/201 - (41%) Gaps:38/201 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    38 FTLPAGQKECFYQPMPLKASLEIEYQV-------------LDGAGLDIDFHLASPEGKTLVFEQR 89
            |.:...:::||.:.:|.:.::.:.|:|             ..|.|:.::  :...:.|.::....
  Fly    23 FHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE--VRDSDDKIVLSRVY 85

Human    90 KSDG-----VHTVETEVGDYMFC-FDNTFSTISEKVIFFELILDNMGEQAQEQED--WKKYITGT 146
            .|.|     .||    .|:::.| |.|:.:..|...:...|.: .:||.|.:...  .|:.:|. 
  Fly    86 SSQGRISFTSHT----PGEHVICMFSNSTAWFSGAQLRVHLDI-QVGEHAIDYAHVAQKEKLTE- 144

Human   147 DILDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSA 211
              |.:::..:|:.:..|...       |...|..|.|.|:..||...||.:||:...||:|.:..
  Fly   145 --LQLRIRQLLDQVEQITKE-------QNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMGF 200

Human   212 IQVYML 217
            ..::.|
  Fly   201 WHLFNL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED5NP_057124.3 EMP24_GP25L 35..222 CDD:426051 42/201 (21%)
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 41/199 (21%)

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