DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCBP2 and HnRNP-K

DIOPT Version :10

Sequence 1:NP_005007.2 Gene:PCBP2 / 5094 HGNCID:8648 Length:366 Species:Homo sapiens
Sequence 2:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster


Alignment Length:492 Identity:107/492 - (21%)
Similarity:168/492 - (34%) Gaps:185/492 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG---PTNAIFKAFAMII 76
            |:|:|:.....|::|||.|:.::|||.:..|.:::.:...|||.|.::.   .|..|........
  Fly    30 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYF 94

Human    77 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ-VQVAGDMLPN 140
            ::.:||..               :||::..|..|.:|||||.||||||:..|.: ::|..::.|.
  Fly    95 EERDEDFD---------------VRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQ 144

Human   141 STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205
            ||:|.:...|....:||.|:::..:..:|    |.||....|  .|.:...::|.....|.|||.
  Fly   145 STDRVVQTVGKQSQVIEAVREVITLTRDT----PIKGAIHNY--DPMNFDRVYADEYGGYGTGSG 203

Human   206 SASFPHTTPSM------------------------------------------------------ 216
            |     |.||.                                                      
  Fly   204 S-----TRPSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGA 263

Human   217 --------CLNP-------DLE------------------------------------GPPLEAY 230
                    .:||       |::                                    |.|.:..
  Fly   264 GMGQRDNPFINPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFG 328

Human   231 TIQGQYAIPQ-----PDLTKLHQLAMQQSHFPM-------------------------------T 259
            ...|.:...|     |.|....|.....|..|.                               .
  Fly   329 GNSGNFGQAQGTNSLPSLGSFSQNQGGTSSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGA 393

Human   260 HGNTGFSGIESSSPEVKGYWAGLDASAQT---------TSHELTIPNDLIGCIIGRQGAKINEIR 315
            :|..||:.:..::....|     ..:|.|         .|.::|||.:|.|.|||:.|.:|..||
  Fly   394 NGAGGFNAVGGANGGPNG-----SPNAATNVPQGHDPNNSTQVTIPKELAGAIIGKGGGRIRRIR 453

Human   316 QMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 352
            ..|.|.|.|..|:..|.||.:||:|:...|.:||||:
  Fly   454 NESSAYITIDEPLPNSNDRIITISGTPKQIQMAQYLL 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCBP2NP_005007.2 KH-I_PCBP1_2_rpt1 13..82 CDD:411943 18/69 (26%)
KH-I_PCBP1_2_rpt2 92..169 CDD:411946 25/77 (32%)
KH-I_PCBP1_2_rpt3 285..360 CDD:411949 31/77 (40%)
HnRNP-KNP_995906.1 KH-I_HNRNPK_rpt1 28..91 CDD:411860 18/60 (30%)
KH-I_HNRNPK_rpt2 100..170 CDD:411861 26/84 (31%)
KH-I_HNRNPK_rpt3 426..498 CDD:411862 29/65 (45%)

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