DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCBP1 and ps

DIOPT Version :10

Sequence 1:	NP_006187.2	Gene:	PCBP1 / 5093	HGNCID:	8647	Length:	356	Species:	Homo sapiens
Sequence 2:	NP_001262415.1	Gene:	ps / 44258	FlyBaseID:	FBgn0261552	Length:	780	Species:	Drosophila melanogaster

Alignment Length:	38	Identity:	10/38 - (26%)
Similarity:	18/38 - (47%)	Gaps:	0/38 - (0%)

- Green bases have known domain annotations that are detailed below.

Human   148 ILVHCAVGVSRSATLVLAYLMLYHHFTLVEAIKKVKDH 185
            ||...|...::.|....|..:|:..:.:.:.:||..||
  Fly   107 ILGKVAEKTNQIAPAFAAATLLFEAYQISKEVKKDIDH 144

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
PCBP1	NP_006187.2	KH-I_PCBP1_2_rpt1	13..82	CDD:411943
		KH-I_PCBP1_2_rpt2	92..169	CDD:411946	5/20 (25%)
		KH-I_PCBP1_2_rpt3	276..351	CDD:411949
ps	NP_001262415.1	KH-I_NOVA_rpt1	274..345	CDD:411863
		KH-I_NOVA_rpt2	367..436	CDD:411864
		KH-I_NOVA_rpt3	694..762	CDD:411807
Blue background indicates that the domain is not in the aligned region.

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