DRSC/TRiP Functional Genomics Resources

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Protein Alignment PBX2 and Pbx2

DIOPT Version :9

Sequence 1:NP_002577.2 Gene:PBX2 / 5089 HGNCID:8633 Length:430 Species:Homo sapiens
Sequence 2:NP_001002828.1 Gene:Pbx2 / 406164 RGDID:1303084 Length:430 Species:Rattus norvegicus


Alignment Length:430 Identity:422/430 - (98%)
Similarity:424/430 - (98%) Gaps:0/430 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDERLLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTITD 65
            |||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MDERLLGPPPPGGGRGGLGLVGGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTITD 65

Human    66 QSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGP 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 QSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGP 130

Human   131 EKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLR 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 EKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLR 195

Human   196 EQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLN 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 EQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLN 260

Human   261 EYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVT 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
  Rat   261 EYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVA 325

Human   326 QGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYSASQVESLRHSMGPGGYGDNLGG 390
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||..||||:||
  Rat   326 QGGHSRTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYPASQVESLRHSMGPASYGDNIGG 390

Human   391 GQMYSPREMRANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430
            ||:||||||||||.||||||||||||||||||||||||||
  Rat   391 GQIYSPREMRANGGWQEAVTPSSVTSPTEGPGSVHSDTSN 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PBX2NP_002577.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 49/50 (98%)
PBC 50..243 CDD:397732 192/192 (100%)
homeodomain 245..305 CDD:238039 59/59 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..347 20/20 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..430 46/51 (90%)
Pbx2NP_001002828.1 PBC 50..243 CDD:281746 192/192 (100%)
homeodomain 245..305 CDD:238039 59/59 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83686199
Domainoid 1 1.000 382 1.000 Domainoid score I11443
eggNOG 1 0.900 - - E1_KOG0774
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48115
Inparanoid 1 1.050 856 1.000 Inparanoid score I6864
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG48762
OrthoDB 1 1.010 - - D109747at40674
OrthoFinder 1 1.000 - - FOG0000743
OrthoInspector 1 1.000 - - oto142355
orthoMCL 1 0.900 - - OOG6_104641
Panther 1 1.100 - - LDO PTHR11850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X78
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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