DRSC/TRiP Functional Genomics Resources

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Protein Alignment F11R and side-VII

DIOPT Version :9

Sequence 1:NP_001369656.1 Gene:F11R / 50848 HGNCID:14685 Length:327 Species:Homo sapiens
Sequence 2:NP_001262432.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster


Alignment Length:296 Identity:70/296 - (23%)
Similarity:107/296 - (36%) Gaps:85/296 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    10 KLLCLFILAILLCSLALGSVTVHSSEPEVRIPENNPVKLSC---AYSGFSSPRVEWKFDQGDTTR 71
            :||.||:||:.|...::||..|...:.|..:.||  :.|.|   .|.|.....|.|..|...|. 
  Fly     2 ELLLLFMLALQLIESSIGSKDVPIHQIESIVGEN--IYLPCNVTTYDGDEPVLVLWYRDDKGTP- 63

Human    72 LVCYNNKITAS-------------YEDRVTFL----PTGITFKSVTREDTGTYTCMV---SEEGG 116
              .|:..|.|.             :.||..|:    |..::.::....|:|||.|.|   ..:..
  Fly    64 --IYSIDIRAGVSKAPKRWSDDSVFGDRAYFIFDKEPGKLSIQNTQASDSGTYRCRVDFLKAQTI 126

Human   117 NSYGEVKVKLIVLVPPSKPTV----NIPSSATI-----GNRAVLTCSEQDGSPPSEYTWFKDGIV 172
            ||    :::|.|:.||.:..:    |:..|..:     |:...|.|....|.|....:|::|||.
  Fly   127 NS----RIRLNVISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTPTISWYRDGIE 187

Human   173 MP----------------TNPKSTRAFSNS-------SYVLNPTTGELV---------------- 198
            :|                |.|...|...||       |:...|....:|                
  Fly   188 IPCELSHLAGGKIIECEITLPSLGREDLNSRLTCRALSHPRAPIVEAVVQIDMNFAPLNIRLLGA 252

Human   199 FDPLSASDTGEYSCEARNGYGTPMT----SNAVRME 230
            ..||||....:..|::. |...|..    .|.:|:|
  Fly   253 HQPLSAGRRYDLLCQSA-GSRPPAVITWWQNGIRLE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
F11RNP_001369656.1 IgV_1_JAM1-like 30..129 CDD:409538 28/121 (23%)
Ig strand B 46..50 CDD:409538 1/3 (33%)
Ig strand C 59..63 CDD:409538 1/3 (33%)
Ig strand E 92..96 CDD:409538 0/3 (0%)
Ig strand F 106..111 CDD:409538 3/4 (75%)
Ig strand G 121..124 CDD:409538 0/2 (0%)
IgI_2_JAM1 135..231 CDD:409542 30/148 (20%)
Ig strand B 149..153 CDD:409542 1/3 (33%)
Ig strand C 163..167 CDD:409542 0/3 (0%)
Ig strand E 195..199 CDD:409542 1/19 (5%)
Ig strand F 209..214 CDD:409542 1/4 (25%)
Ig strand G 224..227 CDD:409542 1/2 (50%)
side-VIINP_001262432.1 IG_like 32..134 CDD:214653 26/110 (24%)
V-set 32..134 CDD:284989 26/110 (24%)
IGc2 160..>214 CDD:197706 13/53 (25%)
Ig 262..328 CDD:299845 6/27 (22%)
IG_like 264..323 CDD:214653 6/25 (24%)
IGc2 360..425 CDD:197706
Ig_3 456..519 CDD:290638
FN3 538..620 CDD:238020
FAM176 643..741 CDD:291517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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