DRSC/TRiP Functional Genomics Resources

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Protein Alignment F11R and DIP-zeta

DIOPT Version :9

Sequence 1:NP_001369656.1 Gene:F11R / 50848 HGNCID:14685 Length:327 Species:Homo sapiens
Sequence 2:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster


Alignment Length:335 Identity:80/335 - (23%)
Similarity:127/335 - (37%) Gaps:65/335 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    24 LALGSVTVHSS-------EPE-------VRIPENNPVKLSCAYSGFSSPRVEW-KFDQGDT---- 69
            :|.|...|.:|       |||       |.:|....|||.|:.....|.:|.| .|:|...    
  Fly    94 VAGGGANVPTSNLNIVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVH 158

Human    70 TRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSE-EGGNSYGEVKVKLIVLVPPS 133
            ..::..|.:|:.:::.........:...:|..||.|.|.|.::. .....:|    .|.|:|||:
  Fly   159 NHVITRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYMCQINTVTAKTQFG----YLNVVVPPN 219

Human   134 KPTVNIPSSATI---GNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTG 195
            ... ::.||..|   |....|.| ...|||.....|.:|        .::|...|.::::|...|
  Fly   220 IDD-SLSSSDVIVREGANISLRC-RASGSPRPIIKWKRD--------DNSRIAINKNHIVNEWEG 274

Human   196 E-LVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVERNVGVIV---AAVLVTLILLGILV-F 255
            : |....:|..|.|.|.|.|.|  |.|.|        |.:.:.|.|   ..:|:...|:|... |
  Fly   275 DTLEITRISRLDMGAYLCIASN--GVPPT--------VSKRIKVSVDFPPMLLIPHQLVGAPEGF 329

Human   256 GIWF-AYSRGHFDKL-----GACPSIFPSH------AVFCPA-DTHDPISSLSGTKKGTSSKKVI 307
            .:.. .::..|...|     |..|.|..||      .|..|| .||..::.::.:.......|.:
  Fly   330 NVTIECFTEAHPTSLNYWTRGEGPIIHDSHKYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCV 394

Human   308 YSQPSARSEG 317
            ...|...::|
  Fly   395 AKNPRGETDG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
F11RNP_001369656.1 IgV_1_JAM1-like 30..129 CDD:409538 26/118 (22%)
Ig strand B 46..50 CDD:409538 3/3 (100%)
Ig strand C 59..63 CDD:409538 2/4 (50%)
Ig strand E 92..96 CDD:409538 0/3 (0%)
Ig strand F 106..111 CDD:409538 2/4 (50%)
Ig strand G 121..124 CDD:409538 0/2 (0%)
IgI_2_JAM1 135..231 CDD:409542 26/99 (26%)
Ig strand B 149..153 CDD:409542 1/3 (33%)
Ig strand C 163..167 CDD:409542 0/3 (0%)
Ig strand E 195..199 CDD:409542 2/4 (50%)
Ig strand F 209..214 CDD:409542 2/4 (50%)
Ig strand G 224..227 CDD:409542 0/2 (0%)
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 22/99 (22%)
Ig 130..200 CDD:143165 17/69 (25%)
I-set 226..310 CDD:254352 28/102 (27%)
IGc2 233..298 CDD:197706 20/75 (27%)
Ig 313..410 CDD:299845 19/92 (21%)
IG_like 325..410 CDD:214653 16/80 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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