Protein Alignment F11R and F11r

DIOPT Version :10

• Sequence 1: NP_001369656.1
• Gene: F11R / 50848
• HGNCID: 14685
• Length: 327
• Species: Homo sapiens
• Sequence 2: NP_766235.1
• Gene: F11r / 16456
• MGIID: 1321398
• Length: 300
• Species: Mus musculus
• Alignment Length: 329
• Identity: 205/329 - (62%)
• Similarity: 250/329 - (75%)
• Gaps: 31/329 - (9%)

Human     1 MGTKAQVERKLLCLFILAILLCSLALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFD 65
            |||:.:..||||.|| .:::|.||..|..:|::::.:|::|||..:||:|.|||||||||||||.
Mouse     1 MGTEGKAGRKLLFLF-TSMILGSLVQGKGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFV 64

Human    66 QGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLV 130
            ||.||.|||||::|||.|.|||||..:||||.||||:|.|.||||||||||.:||||.:.|.|||
Mouse    65 QGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLV 129

Human   131 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPT-NPKSTRAFSNSSYVLNPTT 194
            ||||||:::|||.||||||||||||.||||||||:||||||.|.| :.|.||||.|||:.::|.:
Mouse   130 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS 194

Human   195 GELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAVERNVGVIVAAVLVTLILLGILVFGIWF 259
            |:|:|||::|.|:|||.|:|:|||||.|.|.|..|:|||.|||.|||||||||||||:|:||:||
Mouse   195 GDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELNVGGIVAAVLVTLILLGLLIFGVWF 259

Human   260 AYSRGHFDKLGACPSIFPSHAVFCPADTHDPISSLSGTKKGTS-SKKVIYSQPSARSEGEFKQTS 323
            |||||:|::                            |||||: .|||||||||.||||||||||
Mouse   260 AYSRGYFER----------------------------TKKGTAPGKKVIYSQPSTRSEGEFKQTS 296

Human   324 SFLV 327
            ||||
Mouse   297 SFLV 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
F11R	NP_001369656.1	IgV_1_JAM1-like	30..129	CDD:409538	64/98 (65%)
		FR1	30..52	CDD:409538	8/21 (38%)
		Ig strand A	30..33	CDD:409538	1/2 (50%)
		Ig strand A'	37..41	CDD:409538	1/3 (33%)
		Ig strand B	44..53	CDD:409538	3/8 (38%)
		CDR1	53..58	CDD:409538	4/4 (100%)
		Ig strand C	58..66	CDD:409538	7/7 (100%)
		FR2	59..66	CDD:409538	6/6 (100%)
		CDR2	69..83	CDD:409538	10/13 (77%)
		Ig strand C'	69..74	CDD:409538	3/4 (75%)
		Ig strand C'	77..79	CDD:409538	0/1 (0%)
		FR3	84..112	CDD:409538	19/27 (70%)
		Ig strand D	86..90	CDD:409538	3/3 (100%)
		Ig strand E	92..96	CDD:409538	2/3 (67%)
		Ig strand F	105..113	CDD:409538	6/7 (86%)
		CDR3	113..119	CDD:409538	4/5 (80%)
		Ig strand G	119..128	CDD:409538	5/8 (63%)
		FR4	120..129	CDD:409538	4/8 (50%)
		IgI_2_JAM1	135..231	CDD:409542	63/96 (66%)
		Ig strand A	135..139	CDD:409542	2/3 (67%)
		Ig strand A'	141..144	CDD:409542	2/2 (100%)
		Ig strand B	147..155	CDD:409542	7/7 (100%)
		Ig strand C	163..168	CDD:409542	3/4 (75%)
		Ig strand C'	170..172	CDD:409542	1/1 (100%)
		Ig strand D	187..191	CDD:409542	1/3 (33%)
		Ig strand E	195..199	CDD:409542	2/3 (67%)
		Ig strand F	208..214	CDD:409542	4/5 (80%)
		Ig strand G	221..231	CDD:409542	4/9 (44%)
F11r	NP_766235.1	Ig	29..128	CDD:472250	64/98 (65%)
		Ig strand B	45..49	CDD:409538	2/3 (67%)
		Ig strand C	58..62	CDD:409538	3/3 (100%)
		Ig strand E	91..95	CDD:409538	2/3 (67%)
		Ig strand F	105..110	CDD:409538	3/4 (75%)
		Ig strand G	120..123	CDD:409538	2/2 (100%)
		Ig	134..231	CDD:472250	63/96 (66%)
		Ig strand B	148..152	CDD:409353	3/3 (100%)
		Ig strand C	162..166	CDD:409353	2/3 (67%)
		Ig strand E	195..199	CDD:409353	2/3 (67%)
		Ig strand F	209..214	CDD:409353	3/4 (75%)
		Ig strand G	224..227	CDD:409353	1/2 (50%)