DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX9 and prd

DIOPT Version :10

Sequence 1:NP_006185.1 Gene:PAX9 / 5083 HGNCID:8623 Length:341 Species:Homo sapiens
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:366 Identity:125/366 - (34%)
Similarity:170/366 - (46%) Gaps:82/366 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 65
            |....|.||||||||:|||||||.|||:|||:|..|||||.||||||||||||||||.||.||||
  Fly    24 MNSGQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGS 88

Human    66 ILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNK 130
            |.||.|||||||:.||.:...|..||:..||:|:||||::|:.:||||:...||||:|||::|.:
  Fly    89 IRPGVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVRGR 153

Human   131 -------------------------IGNLAQQGHYDSYKQHQPTPQPALPYNHIYSYPSPITAAA 170
                                     .|:....||:::.|                    |.....
  Fly   154 DAPLDNDMSSASGSPAGDGTKASSSCGSDVSGGHHNNGK--------------------PSDEDI 198

Human   171 AKVPTPPGVPAIPGSVAMPRTWPSSHSVTDILGIRSIT--------DQVSDSSPYHSPKVEEWSS 227
            :...:.||: |:.......||..|:..:.::......|        ::::..:.....:::.|.|
  Fly   199 SDCESEPGI-ALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFS 262

Human   228 LGRNNFPAAAPH-AVNGLEKGALEQEAKYGQAPNGLPAVGSFVSASSMAPYP-TPAQVSPYMTYS 290
            ..|...  ...| :|:|...|.......:..|.:.||:|.|  |..||||.. .|..:.|...|.
  Fly   263 NRRARL--RKQHTSVSGGAPGGAAASVSHVAASSSLPSVVS--SVPSMAPLAMMPGSLDPATVYQ 323

Human   291 AAPSGYVAGHGWQHA-----------------GGTSLSPHN 314
            .....|     ..||                 |.|:..||:
  Fly   324 QQYDFY-----GSHANISVSAAAPMASSNLSPGITTTPPHH 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX9NP_006185.1 PAX 6..131 CDD:238076 85/149 (57%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 7..63 45/55 (82%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 82..130 23/47 (49%)
Interaction with KDM5B. /evidence=ECO:0000269|PubMed:12657635 168..189 3/20 (15%)
prdNP_723721.1 PAX 27..154 CDD:238076 85/126 (67%)
Homeodomain 214..270 CDD:459649 7/57 (12%)

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