DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX7 and sv

DIOPT Version :9

Sequence 1:NP_002575.1 Gene:PAX7 / 5081 HGNCID:8621 Length:520 Species:Homo sapiens
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:662 Identity:174/662 - (26%)
Similarity:239/662 - (36%) Gaps:283/662 - (42%)


- Green bases have known domain annotations that are detailed below.


Human    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98
            |.|.||||||||:||||||:.:|.:|||:||:|:|||.||||||||||||||||.||.||||.:.
  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239

Human    99 GAIGGSKPRQVATPDVEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIK 163
            |.||||||: ||||.|...|..||||||.||:||||||||.:..|.:..|||  ||||:|::|.|
  Fly   240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPS--VSSINRIVRNK 301

Human   164 FGKKEE----------------------------------------------------------- 169
            ..:|.:                                                           
  Fly   302 AAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHAS 366

Human   170 -------------------EDEADKKEDDGEKKAK-HSIDGILG----------DKGNRLDEGSD 204
                               .:|........|::.. :||:||||          :..:.::..::
  Fly   367 IPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNN 431

Human   205 VESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLT-----EARVQVW 264
            .||.    .|||:               .:|.:..|..:|::..:..:|.:::     :....:|
  Fly   432 TESS----CKRKR---------------IEAHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW 477

Human   265 FSNRRARWRKQAGANQLAAFNHLL--PGGFPPT------GMPTLP------------PYQLPDST 309
                ..:|..:.....||...:|.  .|..|.|      |..|.|            ...|.|| 
  Fly   478 ----SGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDS- 537

Human   310 YPTTTISQDGGSTVHRP-----------QPLPPSTMHQGGLAAAAAAADT--------------- 348
              .|||||. .|:::.|           .||.|.:||:..|:|.:....|               
  Fly   538 --ITTISQT-QSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYT 599

Human   349 --------SSAYGARHSFSSYSDSFMNPAAPSNHMNPVSNGLSPQVM------------------ 387
                    ||..|..|       ..|..::.||.:.|:|..:.|.:.                  
  Fly   600 SMTSLENCSSLVGQEH-------IVMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCS 657

Human   388 ------------------------------SILGN----------PSA-VPPQPQADFS---ISP 408
                                          .:.||          ||: :|.||....|   |:|
  Fly   658 EDNNKEPEKSNSSQSSDHIASPHLHHIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINP 722

Human   409 LHG------------GLDSATSI-------SASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSV 454
            ...            ||.|..::       ||.||    |:.||.....:.||       |.|  
  Fly   723 SENRSDVELNLSNNVGLYSTPTVLPSFNHYSAGCS----SVVPGSDYAYNPAY-------TQY-- 774

Human   455 DPVAGYQYGQYG 466
                |..||.||
  Fly   775 ----GGAYGSYG 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX7NP_002575.1 paired box domain 34..164 87/129 (67%)
PAX 34..163 CDD:238076 87/128 (68%)
octapeptide 86..93 4/6 (67%)
paired homeodomain 217..275 6/62 (10%)
Homeobox 220..273 CDD:278475 5/57 (9%)
Pax7 347..385 CDD:289156 10/60 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 389..409 9/33 (27%)
svNP_524633.3 PAX 175..299 CDD:128645 86/126 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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