Sequence 1: | NP_001355839.1 | Gene: | PAX6 / 5080 | HGNCID: | 8620 | Length: | 503 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477026.1 | Gene: | repo / 47285 | FlyBaseID: | FBgn0011701 | Length: | 612 | Species: | Drosophila melanogaster |
Alignment Length: | 303 | Identity: | 88/303 - (29%) |
---|---|---|---|
Similarity: | 126/303 - (41%) | Gaps: | 80/303 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 219 GADGMYDKLR--MLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGE--------------- 266
Human 267 -----NTNSISSNG-------------------EDSDEAQMRLQ---LKRKLQRNRTSFTQEQIE 304
Human 305 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPIS 369
Human 370 SSFSTSVYQPIPQPT--TPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQT 432
Human 433 SSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMG-TSGTTS 474 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PAX6 | NP_001355839.1 | PAX | 85..209 | CDD:128645 | |
Homeobox | 295..348 | CDD:395001 | 35/52 (67%) | ||
repo | NP_477026.1 | Homeobox | 313..360 | CDD:278475 | 30/46 (65%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6207 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |