DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX6 and ey

DIOPT Version :9

Sequence 1:NP_001355839.1 Gene:PAX6 / 5080 HGNCID:8620 Length:503 Species:Homo sapiens
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:674 Identity:272/674 - (40%)
Similarity:315/674 - (46%) Gaps:233/674 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    23 PWNPAA-----PSQSQHAEQGGRSSAAEIKRAVAGANRLPALSLTCGGRTCLWL--KPSP----- 75
            ||:...     ||....|.          |..|.....||.|. |.||.....:  ||||     
  Fly    17 PWSAGTLIERLPSLEDMAH----------KDNVIAMRNLPCLG-TAGGSGLGGIAGKPSPTMEAV 70

Human    76 ---------GSDSHVCT--------GGHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDI 123
                     .:.|:..|        ..||||||||||||.|||||||||||||||||||||||||
  Fly    71 EASTASHPHSTSSYFATTYYHLTDDECHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDI 135

Human   124 SRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLL 188
            ||||||||||||||||||||||||||||||||||||||.||||||:|||||||||||||||||||
  Fly   136 SRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLL 200

Human   189 SEGVCTNDNIPSVSSINRVLRNLASEKQQM----------------------------------- 218
            .|.|||||||||||||||||||||::|:|.                                   
  Fly   201 QENVCTNDNIPSVSSINRVLRNLAAQKEQQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSR 265

Human   219 ----------------------GA---------DGMYDKLRMLNGQTG----------------- 235
                                  ||         :.:|:|||:||.|..                 
  Fly   266 GTLSSSTDLMQTATPLNSSESGGASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQ 330

Human   236 ----------------------------SWGTR---PGWYPGTSVPGQPTQ-------------- 255
                                        ||..|   ..||| ||:...|..              
  Fly   331 SPNHLGTRSSHPQLVHGNHQALQQHQQQSWPPRHYSGSWYP-TSLSEIPISSAPNIASVTAYASG 394

Human   256 --------------------------------------DGCQQQE---GGGENTNSISSNGEDSD 279
                                                  ||.|..|   |.|||:|..:||..:::
  Fly   395 PSLAHSLSPPNDIESLASIGHQRNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTE 459

Human   280 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRA 344
            :.|.||.|||||||||||||.:||::||||||||||||||||||||.||.|||||||||||||||
  Fly   460 DDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRA 524

Human   345 KWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSA 409
            |||||||||||||..::|.:....||:.:|:.....|...:..||..|||..|.:.:.:....| 
  Fly   525 KWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSS- 588

Human   410 LPPMPSFTMAN-NLP--------MQPPVPSQTSSYSCMLPTSPSVNGRSYD------TYTPPHMQ 459
                ||....| |.|        .:.|.|......||   ||.:.|||..:      :..|..:.
  Fly   589 ----PSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSC---TSDNDNGRQSEDCRRVCSPCPLGVG 646

Human   460 THMNSQPMGTSGTTSTGLISPGVS 483
            .|.|:..:.::|......:.|.:|
  Fly   647 GHQNTHHIQSNGHAQGHALVPAIS 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX6NP_001355839.1 PAX 85..209 CDD:128645 117/123 (95%)
Homeobox 295..348 CDD:395001 46/52 (88%)
eyNP_001014693.1 PAX 98..221 CDD:128645 117/122 (96%)
Homeobox 475..527 CDD:278475 45/51 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 242 1.000 Domainoid score I2238
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152885at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.910

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