DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX6 and prd

DIOPT Version :10

Sequence 1:NP_001355839.1 Gene:PAX6 / 5080 HGNCID:8620 Length:503 Species:Homo sapiens
Sequence 2:NP_723721.1 Gene:prd / 34629 FlyBaseID:FBgn0003145 Length:613 Species:Drosophila melanogaster


Alignment Length:478 Identity:179/478 - (37%)
Similarity:237/478 - (49%) Gaps:107/478 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    85 GHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP 149
            |...||||||||:||||||::.|.||||:|..|.|||.|||.|:||:|||||||.||.|||||||
  Fly    27 GQGRVNQLGGVFINGRPLPNNIRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGSIRP 91

Human   150 RAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASE 214
            ..|||||||:||||:.::|.:|||..|.:|:||||::|:.||||.....||||:|:|::|     
  Fly    92 GVIGGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCDRSTAPSVSAISRLVR----- 151

Human   215 KQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSD 279
                |.|...|     |..:.:.|:..|       .|......|.....||.:.|...|:.:.||
  Fly   152 ----GRDAPLD-----NDMSSASGSPAG-------DGTKASSSCGSDVSGGHHNNGKPSDEDISD 200

Human   280 -EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRR 343
             |::..:.||||.:|.||:|:..|::.||:.||||.|||::.||.||.:.:|.||||||||||||
  Fly   201 CESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRR 265

Human   344 AKWRREEKLRNQRRQASN--------TPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML-GRT 399
            |      :||.|....|.        :.||:..|||        :|...:.|.|....:|: |..
  Fly   266 A------RLRKQHTSVSGGAPGGAAASVSHVAASSS--------LPSVVSSVPSMAPLAMMPGSL 316

Human   400 DTALTN-------------TYSALPPMPSFTMANNLPMQPPVPSQ-------TSSYSCMLP---- 440
            |.|...             :.||..||.|..::..:...||...|       |:||  ::|    
  Fly   317 DPATVYQQQYDFYGSHANISVSAAAPMASSNLSPGITTTPPHHHQFYNPSANTASY--IMPGENG 379

Human   441 -TSPSVN----------GRSYDTYTPPHMQTHMNSQP----------------------MGTSGT 472
             |:|:.|          |..|.|.|..|.....|..|                      .|...|
  Fly   380 NTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVT 444

Human   473 TSTGLIS---PGVSVPVQVPGSE 492
            :|:|..|   |..|:.....|||
  Fly   445 SSSGANSGADPSQSLANASAGSE 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX6NP_001355839.1 PAX 85..209 CDD:128645 79/123 (64%)
Homeodomain 293..348 CDD:459649 32/54 (59%)
prdNP_723721.1 PAX 27..154 CDD:238076 81/135 (60%)
Homeodomain 214..270 CDD:459649 33/61 (54%)

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