DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX4 and ey

DIOPT Version :9

Sequence 1:NP_001353039.1 Gene:PAX4 / 5078 HGNCID:8618 Length:351 Species:Homo sapiens
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:567 Identity:167/567 - (29%)
Similarity:217/567 - (38%) Gaps:240/567 - (42%)


- Green bases have known domain annotations that are detailed below.


Human     7 SSMNQLGGLFVNGRPLPLDTRQQIVRLAVSGMRPCDISRILKVSNGCVSKILGRYYRTGVLEPKG 71
            |.:|||||:||.|||||..|||:||.||.||.|||||||||:||||||||||||||.||.:.|:.
  Fly    99 SGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRA 163

Human    72 IGGSKPRLATPPVVARIAQLKGECPALFAWEIQRQLCAEGLCTQDKTPSVSSINRVLR--ALQED 134
            |||||||:||..||::|:|.|.|||::|||||:.:|..|.:||.|..|||||||||||  |.|::
  Fly   164 IGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKE 228

Human   135 Q-----GLPCT------------------------------------------------------ 140
            |     |...|                                                      
  Fly   229 QQSTGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESGGASNSG 293

Human   141 ----------RLR--------SPAVLAPAVLTP-------HSGSETPRGTHP------------- 167
                      :||        .|..|.||...|       |.|:   |.:||             
  Fly   294 EGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLGT---RSSHPQLVHGNHQALQQH 355

Human   168 ----------------------------------------------------------------- 167
                                                                             
  Fly   356 QQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQRNCP 420

Human   168 --------------------GTG----------------------------HRNRTIFSPSQAEA 184
                                |:|                            .||||.|:..|.::
  Fly   421 VATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDS 485

Human   185 LEKEFQRGQYPDSVARGKLATATSLPEDTVRVWFSNRRAKWRRQEKLKWEMQLPGASQGLTVPRV 249
            |||||:|..|||..||.:||....|||..::||||||||||||:|||:.:.:.|.::........
  Fly   486 LEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSS 550

Human   250 APGIISAQQSPGSVPT-AALPALEPLGPSCYQLCWATAPERC--------------LSDTP-PKA 298
            .....|...||.|:.. ::|.:....|||...:...::|...              .|::| |..
  Fly   551 TSATASLTDSPNSLSACSSLLSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIP 615

Human   299 CLKP-CWGHLPPQPNSLDSGLLCLPCP-------SSHCHLASLSGSQ 337
            .::| |.........|.|...:|.|||       ::| |:.|...:|
  Fly   616 HIRPSCTSDNDNGRQSEDCRRVCSPCPLGVGGHQNTH-HIQSNGHAQ 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX4NP_001353039.1 PAX 5..129 CDD:128645 84/121 (69%)
Homeobox 174..226 CDD:306543 29/51 (57%)
eyNP_001014693.1 PAX 98..221 CDD:128645 84/121 (69%)
Homeobox 475..527 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1152885at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.020

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