DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX3 and sv

DIOPT Version :10

Sequence 1:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:635 Identity:172/635 - (27%)
Similarity:251/635 - (39%) Gaps:203/635 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98
            |.|.||||||||:||||||:.:|.:|||:||:|:|||.||||||||||||||||.||.||||.:.
  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239

Human    99 GAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSK-- 161
            |.||||||| |.||.|...|..||||||.||:|||||:||.:|:|.::.|||||||:||:|:|  
  Fly   240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAA 303

Human   162 -----------------FGKGE--EEEADLERKEAEESEKKAKHS--------IDGILSERASAP 199
                             .|.|.  .|..|.......|.:....:|        :....|..||.|
  Fly   304 EKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIP 368

Human   200 ----------------QSDEGSDIDSEPDLPLKRKQR---------------------------- 220
                            .|:|.:.|:|..:      ||                            
  Fly   369 TSGTDSVQVSVGHINANSNETTHINSTAE------QRTTGYSINGILGIQHGHHSHNNNNNSSVN 427

Human   221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLT-----EARVQVWFSNRRARWRKQAGA 280
            .:..|.::.:.:.:| |.:..|..:|::..:..:|.:::     :....:|    ..:|..:...
  Fly   428 NNNNTESSCKRKRIE-AHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW----SGKWCIKDDH 487

Human   281 NQLMAFNHLI--PGGFPPT------AMPTLP------TYQLSETSYQPTSIPQAVSDPSSTVHRP 331
            ..|....:|.  .|..|.|      ...|.|      |...::||....|| ..:|...|:::.|
  Fly   488 KLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSI-TTISQTQSSIYTP 551

Human   332 -----------QPLPPSTVHQSTIPSN-------PDSSSAYCLPSTRHGFSSYTDS--------- 369
                       .||.|.::|:..:.:|       |...:|..........:|..:.         
  Fly   552 AIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHI 616

Human   370 FVPPSGPSN---PMN----PTIGNGLSPQVMGLLTNHGGVPH----QPQ-------TDYALSP-- 414
            .:|.|..||   |::    |.|....|.:|...|||..|...    :|:       :|:..||  
  Fly   617 VMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHL 681

Human   415 -------LTGG----------------LEPT--------------TTVSASCSQRLDHMKSLDSL 442
                   |.|.                |:|:              :.|..:.|..:....:...|
  Fly   682 HHIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVL 746

Human   443 PTSQSY---CPPTYSTTGYSMDPV---TGYQYGQYG--------QSAFHY 478
            |:...|   |......:.|:.:|.   .|..||.||        .|:::|
  Fly   747 PSFNHYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYGYGTGSGLINSSYYY 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 87/124 (70%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93 42/55 (76%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 29/47 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 16/116 (14%)
Homeodomain 220..276 CDD:459649 9/88 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 13/59 (22%)
Pax7 347..391 CDD:403540 12/66 (18%)
svNP_524633.3 PAX 175..299 CDD:128645 87/124 (70%)
Blue background indicates that the domain is not in the aligned region.

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