DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX3 and sv

DIOPT Version :9

Sequence 1:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens
Sequence 2:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster


Alignment Length:635 Identity:172/635 - (27%)
Similarity:251/635 - (39%) Gaps:203/635 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    34 GQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRP 98
            |.|.||||||||:||||||:.:|.:|||:||:|:|||.||||||||||||||||.||.||||.:.
  Fly   175 GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKA 239

Human    99 GAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSK-- 161
            |.||||||| |.||.|...|..||||||.||:|||||:||.:|:|.::.|||||||:||:|:|  
  Fly   240 GVIGGSKPK-VATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAA 303

Human   162 -----------------FGKGE--EEEADLERKEAEESEKKAKHS--------IDGILSERASAP 199
                             .|.|.  .|..|.......|.:....:|        :....|..||.|
  Fly   304 EKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIP 368

Human   200 ----------------QSDEGSDIDSEPDLPLKRKQR---------------------------- 220
                            .|:|.:.|:|..:      ||                            
  Fly   369 TSGTDSVQVSVGHINANSNETTHINSTAE------QRTTGYSINGILGIQHGHHSHNNNNNSSVN 427

Human   221 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLT-----EARVQVWFSNRRARWRKQAGA 280
            .:..|.::.:.:.:| |.:..|..:|::..:..:|.:::     :....:|    ..:|..:...
  Fly   428 NNNNTESSCKRKRIE-AHDENHDTNIHSDNDDGKRQRMSTYSGDQLYTNIW----SGKWCIKDDH 487

Human   281 NQLMAFNHLI--PGGFPPT------AMPTLP------TYQLSETSYQPTSIPQAVSDPSSTVHRP 331
            ..|....:|.  .|..|.|      ...|.|      |...::||....|| ..:|...|:::.|
  Fly   488 KLLAELGNLTASTGNCPATYYEASNGFSTTPISGSGATASGNDTSMLYDSI-TTISQTQSSIYTP 551

Human   332 -----------QPLPPSTVHQSTIPSN-------PDSSSAYCLPSTRHGFSSYTDS--------- 369
                       .||.|.::|:..:.:|       |...:|..........:|..:.         
  Fly   552 AIGPSIGTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALAFDGNYTSMTSLENCSSLVGQEHI 616

Human   370 FVPPSGPSN---PMN----PTIGNGLSPQVMGLLTNHGGVPH----QPQ-------TDYALSP-- 414
            .:|.|..||   |::    |.|....|.:|...|||..|...    :|:       :|:..||  
  Fly   617 VMPESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSSDHIASPHL 681

Human   415 -------LTGG----------------LEPT--------------TTVSASCSQRLDHMKSLDSL 442
                   |.|.                |:|:              :.|..:.|..:....:...|
  Fly   682 HHIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVL 746

Human   443 PTSQSY---CPPTYSTTGYSMDPV---TGYQYGQYG--------QSAFHY 478
            |:...|   |......:.|:.:|.   .|..||.||        .|:::|
  Fly   747 PSFNHYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYGYGTGSGLINSSYYY 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 87/124 (70%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93 42/55 (76%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 29/47 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 16/116 (14%)
Homeobox 222..276 CDD:395001 8/58 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 13/59 (22%)
Pax7 347..391 CDD:403540 12/66 (18%)
svNP_524633.3 PAX 175..299 CDD:128645 87/124 (70%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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