DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX3 and PHDP

DIOPT Version :10

Sequence 1:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens
Sequence 2:NP_523834.1 Gene:PHDP / 37788 FlyBaseID:FBgn0025334 Length:220 Species:Drosophila melanogaster


Alignment Length:116 Identity:56/116 - (48%)
Similarity:69/116 - (59%) Gaps:7/116 - (6%)


- Green bases have known domain annotations that are detailed below.


Human   163 GKGEEEEADLERKEAEESE-KKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTF 226
            |...:|.:.|..|....|| ..|.|:|....::.......|:|..:..      |.||||.||||
  Fly    61 GSLNQESSLLFSKITTVSEFYPATHNIGSYNTDFHLKSYGDDGLSLTD------KSKQRRIRTTF 119

Human   227 TAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 277
            |:.||.|||:.|..|||||||||||:|.:..||||||||||.||||::|||
  Fly   120 TSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFRKQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 19/63 (30%)
Homeodomain 220..276 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351
Pax7 347..391 CDD:403540
PHDPNP_523834.1 Homeodomain 113..169 CDD:459649 39/55 (71%)
Blue background indicates that the domain is not in the aligned region.

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