DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX3 and al

DIOPT Version :10

Sequence 1:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:384 Identity:111/384 - (28%)
Similarity:150/384 - (39%) Gaps:118/384 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   165 GEEEEADLERKEAEESEKKAKHSIDGILSERA--------------------------------- 196
            |..||..||..   ..|.|..|....:|.:||                                 
  Fly     2 GISEEIKLEEL---PQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGT 63

Human   197 SAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 261
            ::|.||..||.:::...| ||||||.|||||:.||||||:||.||||||::||||||.:..||||
  Fly    64 NSPVSDGNSDCEADEYAP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127

Human   262 RVQVWFSNRRARWRKQAGAN-QLMAFNHLIPGG-----------FPP------------------ 296
            |:||||.||||:||||.... |...:|..:|||           .||                  
  Fly   128 RIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQH 192

Human   297 ------------TAMPTLPTYQLSETS--------------YQPTSIPQAVSDPSSTVHRPQPL- 334
                        :|.|.:|:...::..              |.|:|..|::....:.|.|..|| 
  Fly   193 AANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLG 257

Human   335 -PPSTVHQSTIPSNPDS--SSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPTIG---NGLSPQ-V 392
             ||:.:..|....:|:.  :|....|::.|...........|..|..|....:|   ..|||| :
  Fly   258 KPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHL 322

Human   393 MGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPP 451
            :|:               ||:.....|.||.|...:.:  |.|.......|.|....||
  Fly   323 VGI---------------ALTQQASSLSPTQTSPVALT--LSHSPQRQLPPPSHQAPPP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 27/95 (28%)
Homeodomain 220..276 CDD:459649 41/55 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 12/59 (20%)
Pax7 347..391 CDD:403540 10/48 (21%)
alNP_722629.1 Homeodomain 86..142 CDD:459649 41/55 (75%)
OAR 374..391 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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