DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX3 and CG11085

DIOPT Version :10

Sequence 1:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens
Sequence 2:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster


Alignment Length:209 Identity:52/209 - (24%)
Similarity:76/209 - (36%) Gaps:67/209 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   190 GILSERASAPQSDEGSDIDSEP-------------DLPLK---RKQRRSRTTFTAEQLEELERAF 238
            |:|:..||....|..::..|.|             .|.|.   ||.||.||.||..||..|||.|
  Fly   115 GLLAAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKF 179

Human   239 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMPTLP 303
            ....|..:..|.::|:...|:|.:|:.|:.|||.:|::|   |||                    
  Fly   180 RCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQ---NQL-------------------- 221

Human   304 TYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGF-SSYT 367
              :|.:..:|.|.....|                      :.....:....|.||   |. ||::
  Fly   222 --RLEQLRHQATMEKDFV----------------------VQDGGGAGGLGCCPS---GLSSSFS 259

Human   368 DSFVPPSGPSNPMN 381
            .:....:..|||.|
  Fly   260 AAAAAAAAASNPCN 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 16/53 (30%)
Homeodomain 220..276 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 3/41 (7%)
Pax7 347..391 CDD:403540 10/36 (28%)
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.