DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PAX2 and ey

DIOPT Version :9

Sequence 1:NP_003981.3 Gene:PAX2 / 5076 HGNCID:8616 Length:432 Species:Homo sapiens
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:597 Identity:183/597 - (30%)
Similarity:245/597 - (41%) Gaps:209/597 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    17 HGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIKPG 81
            |.||||||||||.||||||..||:||||||.|.|||||||.|:||:||||||||||||||||:|.
  Fly    98 HSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPR 162

Human    82 VIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIRT----K 142
            .||||||:|||.:||.||::|||:.|::||||||||||.|.:|.||.:||||||||::|.    |
  Fly   163 AIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQK 227

Human   143 VQQPFHPTPDGAGTGVTAPGHTI----------------------------VPSTASPPVSS--- 176
            .||     ..|:|:..|:.|::|                            :..||:|..||   
  Fly   228 EQQ-----STGSGSSSTSAGNSISAKVSVSIGGNVSNVASGSRGTLSSSTDLMQTATPLNSSESG 287

Human   177 -ASNDPVGS-----YSINGILGIPRSNGE---KRKRDEVEVYTDPAHIRGGGGLH--LV------ 224
             |||...||     |....:|....:.|.   :..|....|...|.|: |....|  ||      
  Fly   288 GASNSGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHL-GTRSSHPQLVHGNHQA 351

Human   225 -----------------W---TLRDVSEGSVPN-------------------------------- 237
                             |   :|.::...|.||                                
  Fly   352 LQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASVTAYASGPSLAHSLSPPNDIESLASIGHQ 416

Human   238 ----------------------------GDSQSGVDS-------------LRKHLRAD--TFTQQ 259
                                        |::.:|..|             |::.|:.:  :||..
  Fly   417 RNCPVATEDIHLKKELDGHQSDETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTND 481

Human   260 QLEALDRVFERPSYPDVFQASEHIKSEQG------------------------NEYSLPALTPGL 300
            |:::|::.|||..||||| |.|.:..:.|                        |:...|..| |.
  Fly   482 QIDSLEKEFERTHYPDVF-ARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNST-GA 544

Human   301 DEVKSSLSASTN--------PELGSNVSGTQTYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTST 357
            ....||.||:.:        ....|.:||:...|.|       :|:.|...  |.|...:....|
  Fly   545 SATSSSTSATASLTDSPNSLSACSSLLSGSAGGPSV-------STINGLSS--PSTLSTNVNAPT 600

Human   358 LAGMVPGSEFSGNPYSH--PQYTAYNEAWRFSNPALLMPPPGAPPLPLLPLPMTATSYRG-DHIK 419
            |...:..|| |..|..|  |..|:.|:..|.|.....:         ..|.|:....::. .||:
  Fly   601 LGAGIDSSE-SPTPIPHIRPSCTSDNDNGRQSEDCRRV---------CSPCPLGVGGHQNTHHIQ 655

Human   420 LQADSFGLHIVP 431
            ....:.|..:||
  Fly   656 SNGHAQGHALVP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX2NP_003981.3 PAX 16..140 CDD:128645 92/122 (75%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 19..75 46/55 (84%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 94..142 31/51 (61%)
homeodomain 255..>278 CDD:412151 11/22 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 7/28 (25%)
Pax2_C 305..>390 CDD:403565 25/94 (27%)
eyNP_001014693.1 PAX 98..221 CDD:128645 92/122 (75%)
Homeobox 475..527 CDD:278475 15/52 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45636
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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