DRSC/TRiP Functional Genomics Resources

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Protein Alignment PARN and tri1

DIOPT Version :10

Sequence 1:NP_002573.1 Gene:PARN / 5073 HGNCID:8609 Length:639 Species:Homo sapiens
Sequence 2:NP_596054.1 Gene:tri1 / 2540515 PomBaseID:SPBC29A10.09C Length:427 Species:Schizosaccharomyces pombe


Alignment Length:424 Identity:115/424 - (27%)
Similarity:183/424 - (43%) Gaps:62/424 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFL 65
            |||...||...|.::.:.::.|.:.:||.||||:....::    |..:|.::||:.|:|.|:.:.
pombe     1 MEIHGKNFLETLKELEKHVDSAHYVSIDCEFSGLLRDFNL----NNKNTLQDRYELLRKSSIRYT 61

Human    66 LFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVK--------FVCQSSSIDFLASQGFD 122
            :.|.|: ||.|...:.|......|..|        ||.||        |..::|||.||..||||
pombe    62 ILQIGI-TFIYLQNNGKSSCIPVNINV--------SPLVKDELHLKRDFCSEASSIKFLIQQGFD 117

Human   123 FNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFIDQVVEK 187
            |||....|:|||::.|||.|.::.:|:.:.       ...|.....|...|..|.:   :|:...
pombe   118 FNKQLTEGVPYLSRIEERNLIDKVNERSTD-------DLTSSILDACDEEILVDAR---NQIKNW 172

Human   188 IEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEE---- 248
            :...|....:|.|::.....|.||.|...:..::|      ||::..|..::.:.|..|..    
pombe   173 LSSELSHSTSKYLNITTSNRFIRKAIQSLVKIEFP------TLKSYPKRTFLQVRKAIENSTTQC 231

Human   249 ---RKRREQQKHAKEQEELNDA------VGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPL 304
               .|...::..|.:|..||:.      ||...:...|....|.|:.||.:.|:::....|...:
pombe   232 SATSKSELKEDIASDQLILNNLNLIKQNVGLRHLWDYILKKKKSVVCHNGMADLVYLFSLFEGKV 296

Human   305 PADLSEFKEMTTCVFPRLLDTKLM----ASTQPFKDIINNTSLAELEK-RLKETPFNPPKVESAE 364
            |..:.||.|:....|..:.||||:    ...|...|.|....|:.:.| .|...|.|.....|..
pombe   297 PETILEFSELCLSSFKSIYDTKLLYLKSDDLQHVSDGIPTDLLSLVSKISLPPVPSNSSSQRSNV 361

Human   365 GFPS-----YDT--ASEQLHEAGYDAYITGLCFI 391
            ...|     |.:  :.::.||||.|:|.|.|.|:
pombe   362 SLNSLIECPYKSMMSRKRPHEAGKDSYDTALLFV 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PARNNP_002573.1 CAF1 5..390 CDD:461457 111/417 (27%)
RNA_bind 438..512 CDD:400835
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 560..639
tri1NP_596054.1 CAF1 3..394 CDD:461457 112/419 (27%)
Blue background indicates that the domain is not in the aligned region.

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