DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mapk3 and rl

DIOPT Version :9

Sequence 1:XP_038944453.1 Gene:Mapk3 / 50689 RGDID:3046 Length:406 Species:Rattus norvegicus
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:396 Identity:288/396 - (72%)
Similarity:317/396 - (80%) Gaps:28/396 - (7%)


- Green bases have known domain annotations that are detailed below.


  Rat    12 GGEPRGTAGVVPVVPGEVEVVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP 76
            |....|| |...|.....||::||.|:|||||.:|.||||||||||.||.|.:...|||||||||
  Fly     8 GSVVNGT-GSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISP 71

  Rat    77 FEHQTYCQRTLREIQILLRFRHENVIGIRDILRAPTLEAMRDVYIVQDLMETDLYKLLKSQQLSN 141
            ||||||||||||||.||.||:|||:|.||||||..:::.||||||||.|||||||||||:|:|||
  Fly    72 FEHQTYCQRTLREITILTRFKHENIIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSN 136

  Rat   142 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEYV 206
            |||||||||||||||||||||||||||||||||:|.|||||||||||||||||||||||||||||
  Fly   137 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDHTGFLTEYV 201

  Rat   207 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 271
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||::||.
  Fly   202 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRDDLE 266

  Rat   272 CIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYD 336
            ||||.||||||:|||.|..|.||||||.:|:.|||||.:||||||:|||.|||||||||||||||
  Fly   267 CIINEKARNYLESLPFKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYD 331

  Rat   337 PTDEVSRPPAAGRGISVPSVRPVPYCLCPQPVAEEPFTFDMELDDLPKERLKELIFQETARFQPG 401
            |.||                          ||||.||..:||.||:.::.||.|||:||.:|:..
  Fly   332 PGDE--------------------------PVAEVPFRINMENDDISRDALKSLIFEETLKFKER 370

  Rat   402 APE-AP 406
            .|: ||
  Fly   371 QPDNAP 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mapk3XP_038944453.1 STKc_ERK1_2_like 37..397 CDD:270839 275/359 (77%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 275/359 (77%)
S_TKc 38..326 CDD:214567 243/287 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 509 1.000 Domainoid score I311
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 592 1.000 Inparanoid score I944
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D309855at33208
OrthoFinder 1 1.000 - - FOG0000164
OrthoInspector 1 1.000 - - otm45936
orthoMCL 1 0.900 - - OOG6_100339
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X259
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

Return to query results.
Submit another query.