DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Muc26B and cht-1

DIOPT Version :9

Sequence 1:NP_652552.1 Gene:Muc26B / 50424 FlyBaseID:FBgn0040950 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:247 Identity:70/247 - (28%)
Similarity:99/247 - (40%) Gaps:81/247 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PGSCSQYYECQSGVA--------LVNVCSRFFDAKAQ---------------------------- 83
            |...:||.: ::||.        |.|..:|::|:::|                            
 Worm   322 PAKITQYVQ-EAGVGAYFEFCEMLANGATRYWDSQSQVPYLVQGNQWWSYDDEESFANKMAYVKR 385

  Fly    84 ----GCV-------NYNTGCI----EFQP--ASASSPVGGSIAAVPCAEETTTCAPQIITTTTCT 131
                |..       ::|.||.    :..|  :..:..:||.|  :|.....|| ||..:.||..|
 Worm   386 EGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKELGGVI--IPKKGGVTT-APTTVATTVTT 447

  Fly   132 ---PASVTTTTTCAPTTTTTCAPTTTTTCAPTTTTTCAPTT------TTTCAPTTTTTCAPTTTT 187
               |.:...|||.|.|||||.|.||||.   :.|..|:..:      :..|........:.:.:.
 Worm   448 GRPPMTSAVTTTTAATTTTTRAATTTTA---SNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSM 509

  Fly   188 TCAP-----------TTTTTCAPTTTTTCAPTTTTTCAPT-TTTTCAPTTTT 227
            :|..           ||:|....:.|||.||||||..||| ||||.||||||
 Worm   510 SCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTT 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc26BNP_652552.1 CBM_14 43..86 CDD:279884 11/70 (16%)
CBM_14 415..463 CDD:279884
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 15/101 (15%)
Glyco_18 57..399 CDD:214753 11/77 (14%)
CBM_14 481..532 CDD:279884 6/50 (12%)
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.