Protein Alignment PABPC3 and ssx

DIOPT Version :10

• Sequence 1: NP_112241.2
• Gene: PABPC3 / 5042
• HGNCID: 8556
• Length: 631
• Species: Homo sapiens
• Sequence 2: NP_569908.1
• Gene: ssx / 31086
• FlyBaseID: FBgn0024987
• Length: 485
• Species: Drosophila melanogaster
• Alignment Length: 203
• Identity: 61/203 - (30%)
• Similarity: 102/203 - (50%)
• Gaps: 29/203 - (14%)

Human   192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKE 255
            |:.|....:||.|..|.:||...||..:.|:|.| ::|.|.|:|||.::...|::.|:.::||..
  Fly    94 NLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLNGFY 158

Human   256 LNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI 320
            :..|::.|..|           |...|..:|       .||||.||...|:|:.|.:.|||:|.|
  Fly   159 VRNKRLKVSYA-----------RPGGQSIKD-------TNLYVINLSRNINDDMLDRIFSPYGLI 205

Human   321 TSAKVMME--GGRSKGFGFVCFSSPEEATKAVTEMNGRIV--ATKPLYVALAQRKEERQAYLTNE 381
            ....::.:  .||.:|..||.::..|||.:|:..:|..:.  .::|::|.||:...:.:|
  Fly   206 VQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKA----- 265

Human   382 YMQRMASV 389
             .|.||.:
  Fly   266 -AQFMAQI 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PABPC3	NP_112241.2	PABP-1234	11..610	CDD:130689	61/203 (30%)
ssx	NP_569908.1	sex-lethal	<76..272	CDD:273740	61/201 (30%)