DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and LAC1

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_012917.3 Gene:LAC1 / 853861 SGDID:S000001491 Length:418 Species:Saccharomyces cerevisiae


Alignment Length:266 Identity:59/266 - (22%)
Similarity:113/266 - (42%) Gaps:50/266 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 KFCENTWRCIYYLYSFIFGVIVLWDKP-WFWDVKSCWYGYPHQSISND-IWWYYMISMSFYWSLT 197
            :..|..:...|...|..||:..::... ||::.|:.:..||  ..:|. ::..:.:..:.:|:..
Yeast   172 RIMEQMYAIFYTGVSGPFGIYCMYHSDLWFFNTKAMYRTYP--DFTNPFLFKVFYLGQAAFWAQQ 234

  Fly   198 GTQF---FDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAK 259
            ....   .:..|||..::..||:|||||:..|:|.:..::|..:.:..|.:|..|..:|...|..
Yeast   235 ACILVLQLEKPRKDHNELTFHHIVTLLLIWSSYVFHFTKMGLPIYITMDVSDFLLSFSKTLNYLD 299

  Fly   260 YQKLCDAIFAIFTVVWIVTRLGFYPRIIYSSSVEAPRILPMF--PAYYIFN-------------- 308
             ..|....||||.|.||..|.....:|::|       :|..|  ...|:.|              
Yeast   300 -SGLAFFSFAIFVVAWIYLRHYINLKILWS-------VLTQFRTEGNYVLNFATQQYKCWISLPI 356

  Fly   309 --SLLLMLLVLHVIWTYMILKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTNGSARSKNKSI 371
              .|:..|.::::.|.::|.:::...|.:|::..|...|:|::.:|.|                 
Yeast   357 VFVLIGALQLVNLYWLFLIFRVLYRILWRGILKDDRSDSESDEESDES----------------- 404

  Fly   372 SSAPSD 377
            |:.|:|
Yeast   405 STTPTD 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039
TLC 135..334 CDD:214789 49/221 (22%)
LAC1NP_012917.3 LAG1 9..389 CDD:227391 51/226 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346050
Domainoid 1 1.000 57 1.000 Domainoid score I2652
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I1719
Isobase 1 0.950 - 0 Normalized mean entropy S3160
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm46884
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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