DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and LAG13

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001031037.1 Gene:LAG13 / 837919 AraportID:AT1G13580 Length:308 Species:Arabidopsis thaliana


Alignment Length:329 Identity:105/329 - (31%)
Similarity:169/329 - (51%) Gaps:63/329 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YKDL-IWPIPFAAVVMLVRYTLERFWISPVGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKL 103
            |:|. :.|: ||.....:|:.|:||....:.|.|                  .|.|         
plant    20 YQDFRVLPL-FAVFFPSIRFLLDRFVFEKLAKYL------------------IYGK--------- 56

  Fly   104 VPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKS 168
                .:.||.:...||..::|          ||.|:.|:|:|||.:.|..:.|.:::|||.:.|.
plant    57 ----HRQDMGDDTTERKKKIR----------KFKESAWKCVYYLSAEILALSVTYNEPWFMNTKY 107

  Fly   169 CWYG-----YPHQSISNDIWWYYMISMSFY-WSLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSW 227
            .|.|     :|.|.....:...||....|| :|:....|::.:|.||.....||:.||:|:.||:
plant   108 FWVGPGDQTWPDQQTKLKLKLLYMFVAGFYTYSIFALVFWETRRSDFGVSMGHHIATLILIVLSY 172

  Fly   228 VCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSS 291
            ||:..||||:||.:||.:|:|||..|::||:..:::....|.:|.:.||:.||.:|| .|::|:|
plant   173 VCSFSRVGSVVLALHDASDVFLEVGKMSKYSGAERIASFSFILFVLSWIILRLIYYPFWILWSTS 237

  Fly   292 VEA---------PRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVVDSLQ-KGLMSGDIRS-S 345
            .|.         |...|::  ||:||:||..|||||:.|..::.:::|..:| :|.:|.|:|| |
plant   238 YEVVLELDKDKHPIEGPIY--YYMFNTLLYCLLVLHIYWWVLMYRMLVKQIQDRGKLSEDVRSDS 300

  Fly   346 DSED 349
            :.||
plant   301 EGED 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 7/55 (13%)
TLC 135..334 CDD:214789 78/214 (36%)
LAG13NP_001031037.1 TLC 73..287 CDD:214789 79/225 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 147 1.000 Domainoid score I1449
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1625
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D987268at2759
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm3330
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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