DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and LAG1

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001319643.1 Gene:LAG1 / 822140 AraportID:AT3G25540 Length:310 Species:Arabidopsis thaliana


Alignment Length:325 Identity:101/325 - (31%)
Similarity:167/325 - (51%) Gaps:53/325 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YKDLIWPIPFAAVVMLVRYTLERFWISPVGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKLV 104
            |:||.:...||.....:|:.|:||....:...:........|:.|:.            |:||..
plant    20 YQDLGFLPLFAVFFPTIRFLLDRFVFEKLASLVIYGRMSTNKSDNIK------------DRKKNS 72

  Fly   105 PLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSC 169
            |                ::|          ||.|:.|:|||||.:.:..:.|.:::|||.:....
plant    73 P----------------KVR----------KFKESAWKCIYYLSAELLALSVTYNEPWFSNTLYF 111

  Fly   170 WYG-----YPHQSISNDIWWYYMISMSFY-WSLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWV 228
            |.|     :|.|.:...:.:.||.:..|| :|:....|::.:|.||.....||:.||:|:.||::
plant   112 WIGPGDQIWPDQPMKMKLKFLYMFAAGFYTYSIFALVFWETRRSDFGVSMGHHITTLVLIVLSYI 176

  Fly   229 CNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSV 292
            |.|.|.||::|.:||.:|:|||..|::||...:.|....|.:|.:.|:|.||.:|| .|::|:|.
plant   177 CRLTRAGSVILALHDASDVFLEIGKMSKYCGAESLASISFVLFALSWVVLRLIYYPFWILWSTSY 241

  Fly   293 EAPRIL-----PMFP-AYYIFNSLLLMLLVLHVIWTYMILKIVVDSLQ-KGLMSGDIRS-SDSED 349
            :....:     |..| .||:||:||..|||||:.|..:|.:::|..:| :|.:|.|:|| |:|:|
plant   242 QIIMTVDKEKHPNGPILYYMFNTLLYFLLVLHIFWWVLIYRMLVKQVQDRGKLSEDVRSDSESDD 306

  Fly   350  349
            plant   307  306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 7/55 (13%)
TLC 135..334 CDD:214789 76/211 (36%)
LAG1NP_001319643.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 147 1.000 Domainoid score I1449
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1625
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D987268at2759
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm3330
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X237
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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