DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers4

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_080334.3 Gene:Cers4 / 67260 MGIID:1914510 Length:393 Species:Mus musculus


Alignment Length:380 Identity:143/380 - (37%)
Similarity:227/380 - (59%) Gaps:8/380 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSL 72
            |...|....|||||.|||::.  .|..:|.|:...::...|.|.|::.||...|||...|:.:.:
Mouse     6 SEWLWQETYWLPPNVTWAELE--DRDGLVFAHPHHVLAAFPVALVLVAVRIVFERFVALPLSRWM 68

  Fly    73 GIRSSRPKKAANVPILEKTYAKSTRL-DKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKF 136
            |::....:|....|:|||.:.:..:. ::.::|.|:.|..::.|:.:||:|.||.||:||...||
Mouse    69 GVQDPIRRKIKPNPVLEKYFLRMKQCPEETQMVLLASQCGLTLRQTQRWFRRRRNQDRPSLSKKF 133

  Fly   137 CENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQF 201
            ||..||.::||.||:.|..:|:.:.|.|....||..||||:::..::|:|::.:.||.||..|..
Mouse   134 CEACWRFVFYLCSFVGGTSILYHESWLWSPSLCWENYPHQTLNLSLYWWYLLELGFYLSLLITLP 198

  Fly   202 FDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDA 266
            ||||||||.:..:||.|.:.|:..|:..||.|:|::||::|||:|..||..|:..||.:::.|||
Mouse   199 FDVKRKDFKEQVVHHFVAVGLIGFSYSVNLLRIGAVVLLLHDCSDYLLEGCKILNYAHFRRGCDA 263

  Fly   267 IFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVV 330
            :|.:|.:|:..|||.|:| ::||:|..::.:....|..||.|..||:||.:|||.|..:||:::.
Mouse   264 LFIMFALVFFYTRLIFFPTQVIYTSVYDSIKNSGPFFGYYFFIVLLVMLQILHVYWFCLILRMLY 328

  Fly   331 DSLQKGLMSGDIRSS----DSEDLTDSSGNARLTNGSARSKNKSISSAPSDKGSA 381
            ..|.||.|:.||||.    ||.|....|...:|.||.||....::::.|..:.:|
Mouse   329 SFLHKGQMTEDIRSDVEEPDSSDDEPVSEGPQLKNGMARGSRVAVTNGPRSRAAA 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 16/56 (29%)
TLC 135..334 CDD:214789 83/199 (42%)
Cers4NP_080334.3 Homeobox-like. /evidence=ECO:0000305 67..128 17/60 (28%)
homeodomain <83..128 CDD:238039 14/44 (32%)
TLC 131..332 CDD:214789 83/200 (42%)
Last loop motif. /evidence=ECO:0000250|UniProtKB:Q9HA82 291..301 1/9 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..393 13/43 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849118
Domainoid 1 1.000 55 1.000 Domainoid score I11053
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm43825
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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