DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers4

DIOPT Version :10

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_080334.3 Gene:Cers4 / 67260 MGIID:1914510 Length:393 Species:Mus musculus


Alignment Length:380 Identity:143/380 - (37%)
Similarity:227/380 - (59%) Gaps:8/380 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSL 72
            |...|....|||||.|||::.  .|..:|.|:...::...|.|.|::.||...|||...|:.:.:
Mouse     6 SEWLWQETYWLPPNVTWAELE--DRDGLVFAHPHHVLAAFPVALVLVAVRIVFERFVALPLSRWM 68

  Fly    73 GIRSSRPKKAANVPILEKTYAKSTRL-DKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKF 136
            |::....:|....|:|||.:.:..:. ::.::|.|:.|..::.|:.:||:|.||.||:||...||
Mouse    69 GVQDPIRRKIKPNPVLEKYFLRMKQCPEETQMVLLASQCGLTLRQTQRWFRRRRNQDRPSLSKKF 133

  Fly   137 CENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQF 201
            ||..||.::||.||:.|..:|:.:.|.|....||..||||:::..::|:|::.:.||.||..|..
Mouse   134 CEACWRFVFYLCSFVGGTSILYHESWLWSPSLCWENYPHQTLNLSLYWWYLLELGFYLSLLITLP 198

  Fly   202 FDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDA 266
            ||||||||.:..:||.|.:.|:..|:..||.|:|::||::|||:|..||..|:..||.:::.|||
Mouse   199 FDVKRKDFKEQVVHHFVAVGLIGFSYSVNLLRIGAVVLLLHDCSDYLLEGCKILNYAHFRRGCDA 263

  Fly   267 IFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVV 330
            :|.:|.:|:..|||.|:| ::||:|..::.:....|..||.|..||:||.:|||.|..:||:::.
Mouse   264 LFIMFALVFFYTRLIFFPTQVIYTSVYDSIKNSGPFFGYYFFIVLLVMLQILHVYWFCLILRMLY 328

  Fly   331 DSLQKGLMSGDIRSS----DSEDLTDSSGNARLTNGSARSKNKSISSAPSDKGSA 381
            ..|.||.|:.||||.    ||.|....|...:|.||.||....::::.|..:.:|
Mouse   329 SFLHKGQMTEDIRSDVEEPDSSDDEPVSEGPQLKNGMARGSRVAVTNGPRSRAAA 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 16/56 (29%)
TLC 135..334 CDD:214789 83/199 (42%)
Cers4NP_080334.3 Homeobox-like. /evidence=ECO:0000305 67..128 17/60 (28%)
homeodomain <83..128 CDD:238039 14/44 (32%)
TLC 131..332 CDD:214789 83/200 (42%)
Last loop motif. /evidence=ECO:0000250|UniProtKB:Q9HA82 291..301 1/9 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..393 13/43 (30%)

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