DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers3

DIOPT Version :10

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001157673.1 Gene:Cers3 / 545975 MGIID:2681008 Length:419 Species:Mus musculus


Alignment Length:364 Identity:136/364 - (37%)
Similarity:207/364 - (56%) Gaps:17/364 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKS 71
            |...|||...||||...|:|:.  ....:|......|...||:|.::|:|||..|:|..:|:..:
Mouse    41 FRKWFWSERYWLPPTIKWSDLE--DHDGLVFVKASHLYITIPYAFLLMVVRYFFEKFVATPLANA 103

  Fly    72 LGIRSSRPKKAANVPILEKTYAKST-RLDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVK 135
            |||:.::.|...|. |||..:..|| :.....:..|:|:.:::||::|||.|:|:.|:||..|.|
Mouse   104 LGIKKTQHKIKPNA-ILENFFKHSTSKPSHTDIYGLAKKCNLTERQVERWLRIRQKQNKPCRLQK 167

  Fly   136 FCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQ 200
            |.|:.||..:||...:.|.:.|:||||.:|:...|..||.|.:....:|||::.|||||||..:.
Mouse   168 FQESCWRFTFYLLITMAGAVFLYDKPWAYDLWEVWNDYPRQPLLPSQYWYYILEMSFYWSLVFSL 232

  Fly   201 FFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCD 265
            ..|:|||||....|||:..:.|||.||..|..|.|:||:.:||.:||:||:||:..||.:::.|:
Mouse   233 STDIKRKDFLAHVIHHLAAISLMSFSWCANYIRSGTLVMFIHDISDIWLESAKMFSYAGWKQTCN 297

  Fly   266 AIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILK-- 327
            .:|.|||||:.::|...:| .|:|.:.:.....|..|.:|...|..|::|..|||.|.|.|||  
Mouse   298 TLFFIFTVVFFISRFIIFPFWILYCTLILPLHYLEPFFSYIFLNLQLMILQGLHVYWGYFILKML 362

  Fly   328 ---IVVDSLQKGLMSGDIRS-SDSEDLTDSSGNARLTNG 362
               |...::|      |:|| ::.|:..:....|..|.|
Mouse   363 NRCIFTQNVQ------DVRSDNEEEEEEEEEEEAESTKG 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 18/56 (32%)
TLC 135..334 CDD:214789 83/204 (41%)
Cers3NP_001157673.1 homeodomain 107..161 CDD:238039 17/54 (31%)
TRAM_LAG1_CLN8 167..360 CDD:461055 80/192 (42%)

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