DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers3

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001004852.1 Gene:cers3 / 448139 XenbaseID:XB-GENE-957267 Length:372 Species:Xenopus tropicalis


Alignment Length:364 Identity:148/364 - (40%)
Similarity:219/364 - (60%) Gaps:13/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNVFWSTHIWLPPNTTWADI----APGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPV 68
            |:.||...||||.|.||.|:    ..||      .:...|...||.|.:.||:|:..||...:||
 Frog     6 SDWFWWDRIWLPCNYTWDDLENEEGTGS------VSPSQLYITIPLALLFMLLRFAFERAIATPV 64

  Fly    69 GKSLGIRSSRPKKAANVPILEKTYAK-STRLDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPST 132
            ..::||:|....||:|.|:.|..|.. |.....:::..|:|:::.:..::|||:|.||.||:|:.
 Frog    65 ASAMGIKSKLRLKASNNPVFESFYISCSKHPSHEEMYGLAKKSNRTSIQVERWFRRRRNQDRPAV 129

  Fly   133 LVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLT 197
            |.||.|:.||..:||.:.:.||.||:|||||.||...|.|||.|.:....:|||::.:||||:|.
 Frog   130 LKKFQESCWRFTFYLCALVGGVAVLYDKPWFHDVWEVWVGYPKQEVLTSQYWYYVMELSFYWALL 194

  Fly   198 GTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQK 262
            .:...||:||||....:||:.|:.|::.||.....|||:|.|:|||.:||.|||||:..||.:::
 Frog   195 FSVASDVRRKDFKVQVVHHLATIFLLNFSWSVKYIRVGTLTLLVHDLSDILLEAAKMCSYADWKR 259

  Fly   263 LCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMIL 326
            .|:.:|.||.||:|::||..:| .|||:::|......|.|..||.||.|:.:|..||:.|||:|.
 Frog   260 SCNVLFIIFAVVFIISRLIIFPFWIIYATTVYPLYYCPRFFLYYFFNMLMFVLQFLHIYWTYLIF 324

  Fly   327 KIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTNGSAR 365
            : :|..:..|.||||.||...|:.:|.:.:..||||..:
 Frog   325 R-MVKKVISGNMSGDDRSDKEEEDSDENDDHSLTNGDGK 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 18/56 (32%)
TLC 135..334 CDD:214789 89/199 (45%)
cers3NP_001004852.1 homeodomain <92..126 CDD:238039 10/33 (30%)
TRAM_LAG1_CLN8 132..325 CDD:367664 88/192 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

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