DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and AT1G26200

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001323183.1 Gene:AT1G26200 / 3766796 AraportID:AT1G26200 Length:323 Species:Arabidopsis thaliana


Alignment Length:359 Identity:98/359 - (27%)
Similarity:166/359 - (46%) Gaps:87/359 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SRPDVVHANY---KDLIWPIPFAAVVMLVRYTLERFWISPVGKSLGIRSSRPKKAANVPILEKTY 92
            ||||....:|   .|.:..|.||...:.:|..|:|.                       |.|   
plant     7 SRPDWDQESYPDSSDFLVLIFFAPFFLFLRLILDRC-----------------------IFE--- 45

  Fly    93 AKSTRLDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVL 157
                |:.::.:||.....|.:||.              ..:|||.|:.|:|:.......|.:.|.
plant    46 ----RVARRLVVPKGLCADSNERR--------------KKVVKFKESAWKCLCSFSVEAFALYVT 92

  Fly   158 WDKPWFWDVKSCWYG-----YPHQSISNDIWWYYM----ISMSFYWSLTGTQFFDVKRKDFWQMF 213
            :.:|||.|.:|.|.|     :|.|.|...:...||    :::..:::|.   |::.:|.||..|.
plant    93 YKEPWFKDTRSFWLGPGDQVWPDQKIKLKMKGMYMFVGGLNVYAFFALF---FWETRRSDFKVML 154

  Fly   214 IHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFAIFTVVWIVT 278
            :||:||..|:.||:|....|:||::|.:|:.:|:|||..|:.||:..:.:....|.:|.:.|...
plant   155 VHHIVTSFLIILSYVFRFARIGSVILALHEISDVFLEIGKMCKYSGAETMTSVSFVLFFLSWTTL 219

  Fly   279 RLGFYP-RIIYSS-----------SVEAPRIL--------------PMFPAYYIFNSLLLMLLVL 317
            ||.:|| .|::|:           |.|:.::.              |:...||:||:||..|.:|
plant   220 RLIYYPFWILWSTRFSTYICMNLCSYESIKVKTEYWDKKHLMETGPPLILFYYVFNTLLYCLQIL 284

  Fly   318 HVIWTYMILKIVVDSLQ-KGLMSGDIRS-SDSED 349
            |:.|..:|.::::..:: ||.::.|||| |:.||
plant   285 HIYWWILIYRVLISQIRAKGKVAKDIRSDSEGED 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 8/55 (15%)
TLC 135..334 CDD:214789 68/233 (29%)
AT1G26200NP_001323183.1 TRAM_LAG1_CLN8 70..294 CDD:397737 68/226 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 147 1.000 Domainoid score I1449
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1625
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D987268at2759
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm3330
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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