DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers5

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_955922.1 Gene:cers5 / 323020 ZFINID:ZDB-GENE-030131-1740 Length:387 Species:Danio rerio


Alignment Length:382 Identity:162/382 - (42%)
Similarity:241/382 - (63%) Gaps:16/382 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSLGIR 75
            ||:...|||.|.||||:|..: |.|.:.....|:..:|.|..:..||...|||...|....|.|:
Zfish     8 FWNERFWLPHNVTWADLADPA-PGVEYPKAGHLLSALPLALGIFAVRIFFERFIAGPCASMLQIQ 71

  Fly    76 SSRPKKAANVPILEKTYAKSTRL-DKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCEN 139
            :...::|....:|||.:...|:. |.:....||||.|...|:::||:|.||.||||||..||||:
Zfish    72 TELSRRAQPNAVLEKVFTSITKSPDSRHSEGLSKQLDWDVRKVQRWFRHRRNQDKPSTRTKFCES 136

  Fly   140 TWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQFFDV 204
            .||..:||..|.:|:..||..||.||.:.|||.||:|.:::.:::||:..::|||||..:||.|:
Zfish   137 MWRFTFYLSIFTYGMRFLWQSPWMWDTRQCWYNYPYQVLTSGLYYYYVTELAFYWSLMFSQFTDI 201

  Fly   205 KRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFA 269
            |||||..|||||:.|:.|:|.|:|.|:.||||||:.|||.:|..||||||..|||||::||.:|.
Zfish   202 KRKDFLIMFIHHLATIGLISFSYVNNMLRVGSLVMCVHDASDFLLEAAKLANYAKYQRVCDVVFV 266

  Fly   270 IFTVVWIVTRLGFYPRIIYSSSV-EAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVVDSL 333
            ||.:::..|||..:|..|.:::: |:.:|:..:|::::||.|||:|.|||:.|:|:|.:|...::
Zfish   267 IFGIIFFGTRLIIFPFWILNTTLFESWQIIGPYPSWWLFNFLLLVLQVLHIFWSYLIARIAFKAI 331

  Fly   334 QKGLMSGDIRS---SDSEDLTDSSGNARLTNGSARSKNKSISSAPSDKGSAGGAGSR 387
            .:|.:|.|.||   |.||:.|:::|..||.:.|||.:|          |:.|..||:
Zfish   332 VRGKVSKDDRSDIESSSEEETETTGKERLKSASARGEN----------GTNGHFGSK 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 20/56 (36%)
TLC 135..334 CDD:214789 95/199 (48%)
cers5NP_955922.1 homeodomain 81..128 CDD:238039 19/46 (41%)
TRAM_LAG1_CLN8 132..325 CDD:281751 94/192 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594681
Domainoid 1 1.000 219 1.000 Domainoid score I2578
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23634
Inparanoid 1 1.050 323 1.000 Inparanoid score I2485
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm25982
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - LDO PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.830

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