DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers2

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001028872.2 Gene:Cers2 / 310667 RGDID:1310059 Length:380 Species:Rattus norvegicus


Alignment Length:367 Identity:138/367 - (37%)
Similarity:212/367 - (57%) Gaps:6/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISP 67
            :|....:.||...:|||.|.||||:.  .:...|:|...||...:|.|.:.:::||..|.:..:|
  Rat     1 MLQTLYDYFWWERLWLPVNLTWADLE--DKDGRVYAKASDLYITLPLALLFLIIRYFFELYVATP 63

  Fly    68 VGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKLVP-LSKQTDMSEREIERWWRLRRAQDKPS 131
            :...|.::.....:|.....||..|....:..|:..|. ||:|:.:|.|::|||:|.||.||:||
  Rat    64 LAALLNVKEKTRLRAPPNATLEHFYLTVGKQPKQVEVDLLSRQSGLSGRQVERWFRRRRNQDRPS 128

  Fly   132 TLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSL 196
            .|.||.|.:||..|||.:|:.|:.|..|||||:|::..|.|||.|||....:|||||.::|||||
  Rat   129 LLKKFREASWRFTYYLIAFVAGMAVTVDKPWFYDLRKVWEGYPIQSIIPSQYWYYMIELAFYWSL 193

  Fly   197 TGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQ 261
            ..:...|||||||.:..|||:.|::|:..||..|..|.|:|::.:||.:|..||:||:..||.::
  Rat   194 LFSIASDVKRKDFKEQIIHHVATIILLCFSWFANYVRAGTLIMALHDSSDYLLESAKMFNYAGWK 258

  Fly   262 KLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMI 325
            ..|:.:|.:|.||:|:|||...| .|::.:.:......|.|..||.|||::::|.:|||.|.|.|
  Rat   259 NTCNNLFIVFAVVFIITRLVIMPFWILHCTMIYPLEFYPAFFGYYFFNSMMVVLQMLHVFWAYFI 323

  Fly   326 LKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTNGSARSK 367
            :::....:...|:..:  .||.|:...|.|........|:|:
  Rat   324 VRMAHKFITGKLVEDE--RSDREETESSEGEEAAAGAGAKSR 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 19/56 (34%)
TLC 135..334 CDD:214789 86/199 (43%)
Cers2NP_001028872.2 homeodomain 71..128 CDD:238039 19/56 (34%)
TLC 131..332 CDD:214789 86/200 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352734
Domainoid 1 1.000 72 1.000 Domainoid score I9115
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X237
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

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