DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers2a

DIOPT Version :10

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_705957.1 Gene:cers2a / 259251 ZFINID:ZDB-GENE-020808-2 Length:383 Species:Danio rerio


Alignment Length:377 Identity:143/377 - (37%)
Similarity:213/377 - (56%) Gaps:8/377 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISP 67
            :|:..|..||:..:|.|.:..|||:.  .|..|.:|...||...:|.|...:::|...||.....
Zfish     1 MLSRLSEWFWNERLWFPGDLGWADLE--DRDGVTYAKTADLWVTLPIALTFLIIRQVFERTVAIR 63

  Fly    68 VGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKK--KLVPLSKQTDMSEREIERWWRLRRAQDKP 130
            :..:||::.....:||:.|:|| .|.:||....|  ::..|.|:|..:||||.||:|.||.|::|
Zfish    64 LATALGVKEKVRVRAAHNPMLE-AYFRSTSKSPKQAEVESLVKKTGHTEREIHRWFRRRRNQERP 127

  Fly   131 STLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWS 195
            :.|.||.|.:||..:||.:||.|:..|.|||||:|.|..|.|:|...:....:|||||.:.||.|
Zfish   128 NQLKKFREASWRFTFYLVAFIAGLAALIDKPWFYDTKEMWAGFPVLPLLPSQYWYYMIELGFYMS 192

  Fly   196 LTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKY 260
            |..:...|||||||.:..:||:.|:||:|.||..|..|.|:|:::|||.:|..||:||:..||.:
Zfish   193 LLFSVASDVKRKDFKEQIVHHVATILLISFSWCVNYIRAGTLIMLVHDASDYLLESAKMFNYAGW 257

  Fly   261 QKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYM 324
            :|.|:.||.||..::|:|||..:| .|::.:.|....:.|.|..||.||.||.:|..||:.|..:
Zfish   258 RKTCNYIFIIFAAIFIITRLVIFPFWILHCTWVYPVTVYPPFFGYYFFNGLLFVLQCLHIFWAVL 322

  Fly   325 ILKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTNGSARSKNKSISSAPS 376
            ||::.:..|....:..|.||...|  |||..:........|.||..:.:..|
Zfish   323 ILRMAIKFLPGNNIVEDERSDREE--TDSEDDDEEDEKDRRVKNGPVLNGHS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 22/57 (39%)
TLC 135..334 CDD:214789 86/199 (43%)
cers2aNP_705957.1 homeodomain <84..129 CDD:238039 20/45 (44%)
TLC 131..331 CDD:214789 86/199 (43%)

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