DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers4a

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_705956.1 Gene:cers4a / 259250 ZFINID:ZDB-GENE-020808-1 Length:406 Species:Danio rerio


Alignment Length:387 Identity:151/387 - (39%)
Similarity:216/387 - (55%) Gaps:23/387 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWIS 66
            ||:|.:   .|....||||..||.|||.|:.....|...:||:...|.|...:.:|:..||....
Zfish     6 DIVNRW---LWREDFWLPPGVTWKDIAEGTSDGSRHPVPRDLLISFPLALGFIALRFVFERVVAL 67

  Fly    67 PVGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKLVP-------LSKQTDMSEREIERWWRLR 124
            |:.:.||:|.........||.||..|     |.|||..|       |.|...:|||:|:.|.|.|
Zfish    68 PLSRRLGVRDRVRLHITPVPKLEAFY-----LQKKKTEPSQEDLQALVKLCGLSERQIQSWLRRR 127

  Fly   125 RAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMIS 189
            |.||:|:...||.|.:||..:||..|..|:|.|...|||||.:.||.|||.|:::...:|||:|.
Zfish   128 RIQDRPANSRKFSEASWRFGFYLIIFSAGLISLIHTPWFWDHRECWSGYPAQAVAEAQYWYYIIE 192

  Fly   190 MSFYWSLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKL 254
            :|||.||......|:|||||.:..|||:.|:.|::.|:..|..|||:||::|||.:|..||:||:
Zfish   193 LSFYLSLLLCVSVDIKRKDFQEQIIHHIATIFLIAFSYCANYVRVGTLVMLVHDSSDFLLESAKM 257

  Fly   255 TKYAKYQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLH 318
            ..||.::|.|||:|.:|..|::||||..:| ||:|::.|::..:...:|.||.||.|||:|..||
Zfish   258 FNYAGWRKTCDALFVVFAAVFLVTRLIVFPFRIVYTAVVDSLIVFSPYPGYYFFNGLLLVLQALH 322

  Fly   319 VIWTYMILKIVVDSLQKGLMSGDIRSSDSE--DLTDSSGNA-----RLTNGSARSKNKSISS 373
            :.|.::||::|...:..|.:..|.||.|..  |..|..|..     ....|:..||..|:::
Zfish   323 IFWAWLILRMVHKFVFLGKVERDERSDDESEPDEDDEVGEEEERSWEQKKGALNSKLASLAN 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 23/62 (37%)
TLC 135..334 CDD:214789 90/199 (45%)
cers4aNP_705956.1 homeodomain 76..132 CDD:238039 22/60 (37%)
TLC 137..337 CDD:214789 90/199 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594674
Domainoid 1 1.000 219 1.000 Domainoid score I2578
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X237
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.710

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