DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and lac1

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_596102.1 Gene:lac1 / 2540466 PomBaseID:SPBC3E7.15c Length:384 Species:Schizosaccharomyces pombe


Alignment Length:345 Identity:88/345 - (25%)
Similarity:153/345 - (44%) Gaps:45/345 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KDLIWPIPFAAVVMLVRYTLERFWISPVGK-SLGIRSSRPKKAANVPILEKTYAKSTRLD----- 99
            |:..|.:|...:.:||.:    ::::|.|. ..||..|.|....|    ...|.|. |||     
pombe    55 KEKTWIVPLILLTLLVGW----YFVNPNGYIKYGIFLSYPIPGTN----PAQYGKG-RLDIAFCL 110

  Fly   100 -KKKLVPLSKQTDMSE--REIERWWRLRRAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKP 161
             ........::..|.|  ..|.|.:.:|    .|:.|.:|.|..:.|:|:.....:|:.|:...|
pombe   111 FYALFFTFCREFIMQEIIARIGRHFNIR----APAKLRRFEEQAYTCLYFTVMGSWGLYVMKQTP 171

  Fly   162 -WFWDVKSCWYGYPHQSISNDIWWYYMISMSFYW---SLTGTQFFDVKRKDFWQMFIHHMVTLLL 222
             ||::..:.|..|||.........:|:|..: ||   :|......:..||||.::.:||::||||
pombe   172 MWFFNTDAFWEEYPHFYHVGSFKAFYLIEAA-YWIQQALVLILQLEKPRKDFKELVVHHIITLLL 235

  Fly   223 MSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFAIFTVVWIVTR--LGFYPR 285
            :.||:..:...:|..|.:..|.:||:|..:|...|.. ..:...||.||..|||..|  |.|  :
pombe   236 IGLSYYFHFTWIGLAVFITMDTSDIWLALSKCLNYVN-TVIVYPIFVIFVFVWIYMRHYLNF--K 297

  Fly   286 IIYS--------SSVEAPRILPMFPAYYIFNSLLLMLLVLHVI---WTYMILKIVVDSLQKGLMS 339
            |:::        :|.:.......:..:...:..|::|..|.::   |..:||:|...:.... .:
pombe   298 IMWAVWGTMRTINSFDLDWAAEQYKCWISRDVTLILLTALQLVNIYWLILILRIGYRAFTTN-DT 361

  Fly   340 GDIRSSD-SEDLTDSSGNAR 358
            .|.||.| .|:::|...:|:
pombe   362 HDERSEDEDEEVSDEKSSAK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 13/63 (21%)
TLC 135..334 CDD:214789 57/215 (27%)
lac1NP_596102.1 LAG1 1..384 CDD:227391 88/345 (26%)
TRAM1 85..138 CDD:285576 13/57 (23%)
TRAM_LAG1_CLN8 145..350 CDD:281751 55/208 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 118 1.000 Inparanoid score I1519
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm47335
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
TreeFam 00.000 Not matched by this tool.
98.990

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