DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers6

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001334090.1 Gene:Cers6 / 241447 MGIID:2442564 Length:392 Species:Mus musculus


Alignment Length:372 Identity:154/372 - (41%)
Similarity:232/372 - (62%) Gaps:20/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSLGIR 75
            ||:...|||.|.||||:.  :..:......:||....|.|..:.:||...|||...|...:|.|:
Mouse     8 FWNERFWLPHNVTWADLK--NTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFIAKPCAIALNIQ 70

  Fly    76 SSRPKKAANVPILEKTYAKSTR-LDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCEN 139
            ::.|:.|....||||.:...|: .|:|:|..||||.|...|.|:||:|.||.|:|||||.:|||:
Mouse    71 ANGPQTAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCES 135

  Fly   140 TWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQFFDV 204
            .||..:|||.|.:||..|...||.|:.:.|||.||:|.::.|:.:||::.:||||||..:||.|:
Mouse   136 MWRFSFYLYVFSYGVRFLKQTPWLWNTRHCWYNYPYQPLTADLHYYYILELSFYWSLMVSQFTDI 200

  Fly   205 KRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFA 269
            |||||..||:||:.|:.|::.|:|.|:.|||:|||.:||.||..|||||:..|||:||:||.:|.
Mouse   201 KRKDFGIMFLHHLATIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFV 265

  Fly   270 IFTVVWIVTRLGFYPRIIYSSSV-EAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVVDSL 333
            :|.||:|.||||.:|..:.:::: |:..|:..:|::::||.|||:|..|:..|:|:|:||...::
Mouse   266 MFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNLLLLLLQGLNCFWSYLIVKIACKTV 330

  Fly   334 QKGLMS------------GDIRSSDSEDLTDSSG----NARLTNGSA 364
            .||...            .||.||..::.::..|    ::..|||::
Mouse   331 SKGKAGKWNPLHVSKDDRSDIESSSDDEDSEPPGKKPHSSTTTNGTS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 24/56 (43%)
TLC 135..334 CDD:214789 94/199 (47%)
Cers6NP_001334090.1 homeodomain 76..127 CDD:238039 23/50 (46%)
TRAM_LAG1_CLN8 131..324 CDD:367664 92/192 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849120
Domainoid 1 1.000 218 1.000 Domainoid score I2644
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 315 1.000 Inparanoid score I2539
Isobase 1 0.950 - 0 Normalized mean entropy S3160
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm43825
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.770

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