DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and Cers6

DIOPT Version :10

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001334090.1 Gene:Cers6 / 241447 MGIID:2442564 Length:392 Species:Mus musculus


Alignment Length:372 Identity:154/372 - (41%)
Similarity:232/372 - (62%) Gaps:20/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSLGIR 75
            ||:...|||.|.||||:.  :..:......:||....|.|..:.:||...|||...|...:|.|:
Mouse     8 FWNERFWLPHNVTWADLK--NTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFIAKPCAIALNIQ 70

  Fly    76 SSRPKKAANVPILEKTYAKSTR-LDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFCEN 139
            ::.|:.|....||||.:...|: .|:|:|..||||.|...|.|:||:|.||.|:|||||.:|||:
Mouse    71 ANGPQTAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCES 135

  Fly   140 TWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTGTQFFDV 204
            .||..:|||.|.:||..|...||.|:.:.|||.||:|.::.|:.:||::.:||||||..:||.|:
Mouse   136 MWRFSFYLYVFSYGVRFLKQTPWLWNTRHCWYNYPYQPLTADLHYYYILELSFYWSLMVSQFTDI 200

  Fly   205 KRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFA 269
            |||||..||:||:.|:.|::.|:|.|:.|||:|||.:||.||..|||||:..|||:||:||.:|.
Mouse   201 KRKDFGIMFLHHLATIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFV 265

  Fly   270 IFTVVWIVTRLGFYPRIIYSSSV-EAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVVDSL 333
            :|.||:|.||||.:|..:.:::: |:..|:..:|::::||.|||:|..|:..|:|:|:||...::
Mouse   266 MFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNLLLLLLQGLNCFWSYLIVKIACKTV 330

  Fly   334 QKGLMS------------GDIRSSDSEDLTDSSG----NARLTNGSA 364
            .||...            .||.||..::.::..|    ::..|||::
Mouse   331 SKGKAGKWNPLHVSKDDRSDIESSSDDEDSEPPGKKPHSSTTTNGTS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 24/56 (43%)
TLC 135..334 CDD:214789 94/199 (47%)
Cers6NP_001334090.1 homeodomain 76..127 CDD:238039 23/50 (46%)
TRAM_LAG1_CLN8 131..324 CDD:461055 92/192 (48%)

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