DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and hyl-2

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_508803.3 Gene:hyl-2 / 180743 WormBaseID:WBGene00002044 Length:329 Species:Caenorhabditis elegans


Alignment Length:378 Identity:111/378 - (29%)
Similarity:181/378 - (47%) Gaps:72/378 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FWSTHI-WLPPNTTWADI-APGSRPDVVHANYKDLIWPIPFAAVVMLV-RYTLERFWISPVGKSL 72
            :|:..: |||...:|:|: ...:.|..::.:|..| |......:.::: |:..|.:...|:...|
 Worm     3 WWTDALYWLPRGVSWSDMYNKTTEPGYMYPHYSHL-WMTVLTGISLIIYRFVFENYIFVPLAHFL 66

  Fly    73 GIRSSRPKKAANVPILEKTYAKSTRLDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTLVKFC 137
            . |.:.|:            .:...||::|     |.:.|:|                      |
 Worm    67 S-RKNPPE------------TRRGTLDREK-----KYSRMAE----------------------C 91

  Fly   138 ENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLT-GTQF 201
              ..|.:||..||:.|:.::..:...:|:..||..:|...|.|.:.|||.|...||.:|. |..|
 Worm    92 --AMRALYYTISFVCGLYLVLHESHLYDITECWRNWPFHPIPNAVAWYYWIQGGFYIALVFGILF 154

  Fly   202 FDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDA 266
            .|.||.|||||.:||.:||.|:.:||..|:.|||:|:||.||..||.::..|:.:|.:::.....
 Worm   155 LDAKRSDFWQMLVHHFITLALIGVSWTMNMVRVGTLILVSHDAVDILIDVGKILRYEQFETALTI 219

  Fly   267 IFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRIL------------PMFPAYYIFNSLLLMLLVLH 318
            .||....||:.|||.:|| .||.|...:||.::            |..|.:.:.  ||..||:||
 Worm   220 CFAGVLFVWVATRLVYYPFWIIRSVWFDAPALIQDDYEWLNFDQQPQAPRFIML--LLTALLILH 282

  Fly   319 VIWTYMILKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNARLTN-GSARSKNKS 370
            :.|.|::.||..|::|:|::. |:|    ||..:.|    |.| ..|:.:||:
 Worm   283 IFWAYILFKIAYDTIQEGVVD-DVR----EDFDEQS----LVNREKAKQQNKN 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 8/55 (15%)
TLC 135..334 CDD:214789 77/212 (36%)
hyl-2NP_508803.3 TLC 86..298 CDD:214789 79/237 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 180 1.000 Domainoid score I2089
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H23634
Inparanoid 1 1.050 204 1.000 Inparanoid score I2440
Isobase 1 0.950 - 0 Normalized mean entropy S3160
OMA 1 1.010 - - QHG49087
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm14103
orthoMCL 1 0.900 - - OOG6_100372
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.860

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