DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers4

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_031759618.1 Gene:cers4 / 100379773 XenbaseID:XB-GENE-993976 Length:395 Species:Xenopus tropicalis


Alignment Length:394 Identity:153/394 - (38%)
Similarity:228/394 - (57%) Gaps:22/394 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MD-ILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFW 64
            || .||::   .|....||||..||.|:.  ....|::...:||:..:|.|.....||:..|||.
 Frog     1 MDAFLNQW---LWRQEFWLPPGVTWEDME--GTDGVIYPKSRDLLLSVPCALFFTAVRFLFERFV 60

  Fly    65 ISPVGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKKLVP-----LSKQTDMSEREIERWWRLR 124
            ..|:.:.||||....::.:..|:||..||.    :||:.:.     ||.|.:|..|::|.|:|.|
 Frog    61 ALPLSRHLGIREKYRRQPSANPLLEAFYAN----EKKQPLEAEVRYLSAQCNMQIRQVESWFRCR 121

  Fly   125 RAQDKPSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMIS 189
            |.||:||...||||.:||.::|:.||:.|:::|.||||.||.:..|..||:|.:.:.::|||::.
 Frog   122 RNQDRPSISKKFCEASWRFVFYVISFLTGLVLLNDKPWLWDQREFWTDYPYQPLISSLYWYYIME 186

  Fly   190 MSFYWSLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKL 254
            :.||.||..|..|||||||..:..:||:.|:.|:..|:..|..|.||||:::||.||..||.||:
 Frog   187 LGFYSSLLLTISFDVKRKDLKEQIVHHLATIFLIIFSYCANYIRAGSLVMLLHDTADYILELAKM 251

  Fly   255 TKYAKYQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLH 318
            ..|:|::::||.:|.||.||:|||||...| |:|||:...:..|...|..||.||.||::|.:||
 Frog   252 FNYSKWKRVCDVLFIIFAVVFIVTRLVLLPTRVIYSTYYFSMEIFQPFFGYYFFNVLLMVLQILH 316

  Fly   319 VIWTYMILKIVVDSLQKGLMSGDIRSSDSEDLTDSSGNAR---LTNGSA--RSKNKS-ISSAPSD 377
            |.|.|:||::|......|.:..|:||...|.......|.|   ...||.  ||:|.: :...|::
 Frog   317 VFWAYLILRMVYRFTFVGTVENDVRSDIEESEDSGQENFRPPEREKGSNHWRSRNNNCVPHKPAE 381

  Fly   378 KGSA 381
            .|::
 Frog   382 NGAS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 20/60 (33%)
TLC 135..334 CDD:214789 91/199 (46%)
cers4XP_031759618.1 homeodomain 71..128 CDD:238039 20/60 (33%)
TLC 131..330 CDD:214789 91/198 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm48995
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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