DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers3a

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_002662790.2 Gene:cers3a / 100332380 ZFINID:ZDB-GENE-130320-1 Length:380 Species:Danio rerio


Alignment Length:373 Identity:154/373 - (41%)
Similarity:222/373 - (59%) Gaps:14/373 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWI 65
            |.::......||...:|||.|.||||:.  ....:|:|....|...:|:|.:.::|||..||...
Zfish     1 MLVIGTLGEWFWWDRLWLPGNLTWADLK--DEDGLVYARPSHLYITLPYALIFLMVRYLFERLIA 63

  Fly    66 SPVGKSLGIRSSRPKKAANVPILEKTY-AKSTRLDKKKLVPLSKQTDMSEREIERWWRLRRAQDK 129
            :|:..||||......:|.:..:||:.: .||....:..:..|.|:...|.|::|||:|.||.||:
Zfish    64 TPLAASLGITEKIRHRAEHNTVLEQHFTTKSKNPGQADIDGLCKKCGWSSRQVERWFRRRRNQDR 128

  Fly   130 PSTLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYW 194
            |..|.||.|.:||.|:||.:||.|:|.|:|||||::|...|..||.||:.:..:|||.:.||||.
Zfish   129 PGVLKKFREASWRMIFYLLAFIGGIIALYDKPWFYNVPEVWSDYPKQSMLDSQYWYYTVEMSFYL 193

  Fly   195 SLTGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAK 259
            ||.....||||||||.:..|||..||.|::.||..|..|||:|||::||.:||.||:||:..|||
Zfish   194 SLVLRITFDVKRKDFKEQIIHHWATLTLLAFSWCGNYIRVGTLVLLIHDSSDILLESAKIFNYAK 258

  Fly   260 YQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTY 323
            :.|.|:.||.:|..|:|:|||..:| .||:.:.|..|...|.|..||.||.:|::||:||:.|.|
Zfish   259 WFKTCNGIFVVFAAVFIITRLIIFPFWIIHCTWVYPPLYYPPFFGYYFFNFMLIVLLMLHIFWAY 323

  Fly   324 MILKIVVDSLQKGLMSGDIRSSDSED---------LTDSSGNARLTNG 362
            :||::|...| .|.::.|.||.:.||         ..|:..:.::|||
Zfish   324 LILRMVKMFL-FGSLTKDERSDNEEDEEDDGETSMTEDNDEHVKVTNG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 17/56 (30%)
TLC 135..334 CDD:214789 98/199 (49%)
cers3aXP_002662790.2 homeodomain 81..128 CDD:238039 15/46 (33%)
TRAM_LAG1_CLN8 134..327 CDD:281751 96/192 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594678
Domainoid 1 1.000 77 1.000 Domainoid score I8765
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 1 1.000 - - otm25982
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.950

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