DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers3b

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:XP_005159054.1 Gene:cers3b / 100141367 ZFINID:ZDB-GENE-080220-32 Length:366 Species:Danio rerio


Alignment Length:374 Identity:144/374 - (38%)
Similarity:220/374 - (58%) Gaps:30/374 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISPVGKSL 72
            |..||...:|||...||||:....  ..|:|....|...:|.|.:::.:|...||....|:.::|
Zfish     3 SEWFWWDRLWLPRPVTWADLQDSE--GCVYARASHLYIILPVAVLLLGLRALYERLIAVPLAQAL 65

  Fly    73 GIRSSRPKKAANVPILE---KTYAK-STRLDKKKLVPLSKQTDMSEREIERWWRLRRAQDKPSTL 133
            |::....|:|::.|:||   :|::| .|:.|.|   .:.|:...|||::|||:|.||.||:|...
Zfish    66 GVKDKIRKRASHNPLLETYYRTHSKHPTQADVK---GVCKKLGWSERQVERWFRQRRNQDRPGVQ 127

  Fly   134 VKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSLTG 198
            .||.|.:||..:||.|...||:.|:|||||:|::..|..:|.||:.:..:|||:..||||.||..
Zfish   128 KKFKEASWRFAFYLCSTFGGVLALYDKPWFYDLREVWAKFPKQSLLDSQYWYYITEMSFYGSLLF 192

  Fly   199 TQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQKL 263
            :...|||||||.:..:||..||.|:|.||..|..|:|:||::|||.:|:.||:||:..||.::..
Zfish   193 SVAADVKRKDFKEQLVHHWATLTLLSFSWCANYIRIGTLVMLVHDTSDVLLESAKMFNYAGWETT 257

  Fly   264 CDAIFAIFTVVWIVTRLGFYPRIIYSSSVEAPRILPM-----FPAYYIFNSLLLMLLVLHVIWTY 323
            |:::|.:|.:|::||||..:|..:    :....:.|:     |..||.||::|::||.|||.|..
Zfish   258 CNSVFVVFALVFMVTRLIIFPFWL----IHCTWVYPLDQFEPFFGYYFFNAMLMVLLFLHVFWAS 318

  Fly   324 MILKIVVDSLQKGLMSGDIRSSDSED----------LTDSSGNARLTNG 362
            :||::|...| .|.:.||.||.:.||          .|:.|||. |:||
Zfish   319 LILRMVKKFL-FGNLKGDERSDEEEDEGSEEEYTHAYTNGSGNG-LSNG 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 22/59 (37%)
TLC 135..334 CDD:214789 85/203 (42%)
cers3bXP_005159054.1 homeodomain 72..123 CDD:238039 21/53 (40%)
TLC 128..328 CDD:214789 85/203 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594675
Domainoid 1 1.000 77 1.000 Domainoid score I8765
eggNOG 1 0.900 - - E1_COG5058
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X237
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.810

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