DRSC/TRiP Functional Genomics Resources

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Protein Alignment schlank and cers2

DIOPT Version :9

Sequence 1:NP_652526.1 Gene:schlank / 50392 FlyBaseID:FBgn0040918 Length:400 Species:Drosophila melanogaster
Sequence 2:NP_001090742.1 Gene:cers2 / 100036728 XenbaseID:XB-GENE-852703 Length:378 Species:Xenopus tropicalis


Alignment Length:379 Identity:151/379 - (39%)
Similarity:220/379 - (58%) Gaps:20/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILNEFSNVFWSTHIWLPPNTTWADIAPGSRPDVVHANYKDLIWPIPFAAVVMLVRYTLERFWISP 67
            :|..|.:.||...:|||.|.||||:.  .:...|:|...||...||.|.|.::|||..|.....|
 Frog     1 MLQTFYDYFWWHRLWLPVNLTWADLE--DKDGRVYAKASDLYVTIPLAFVFLIVRYIFEISVAGP 63

  Fly    68 VGKSLGIRSSRPKKAANVPILEKTYAKSTRLDKKK-LVPLSKQTDMSEREIERWWRLRRAQDKPS 131
            :...||::.....:|...|.|||.|..|::..::. |..|||.:.::.|::|||:|.||.:|:||
 Frog    64 LANVLGVKDKVRLRAGPNPGLEKFYTCSSKHPRQSDLENLSKASRLTVRQVERWFRRRRNEDRPS 128

  Fly   132 TLVKFCENTWRCIYYLYSFIFGVIVLWDKPWFWDVKSCWYGYPHQSISNDIWWYYMISMSFYWSL 196
            ...||.|.:||..:||.:||.|:.||.|||||.|:...|.|:|.|::....:|||||.:.|||||
 Frog   129 LQKKFREASWRFTFYLIAFIAGIAVLIDKPWFHDLHEVWKGFPKQTMLPSQYWYYMIELGFYWSL 193

  Fly   197 TGTQFFDVKRKDFWQMFIHHMVTLLLMSLSWVCNLHRVGSLVLVVHDCADIFLEAAKLTKYAKYQ 261
            .....||||||||.:..|||:.|::|:|.||..|..|||:||:|:||.:|.|||:||:..||.::
 Frog   194 LFRVAFDVKRKDFKEQIIHHVATIVLISFSWCANYIRVGTLVMVLHDASDYFLESAKMFNYAGWK 258

  Fly   262 KLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSVEAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMI 325
            :.|:.||.:|.:|:||||:..:| .|:|.:......:.|.|..||.||.:|.:|..||:.|.|:|
 Frog   259 ETCNGIFIVFALVFIVTRIIIFPFWILYCTWFYPLEVYPAFFGYYFFNVMLWVLQCLHIFWAYLI 323

  Fly   326 L----KIVVDSLQKGLMSGDIRSS-------DSEDLTDSSGNARLTNGSARSKN 368
            |    |.:...|::     |.||.       |.|:..:.:.|..|:||.:...|
 Frog   324 LGMAHKFITGKLEQ-----DERSDRDETDIPDEEEEEEPTKNGTLSNGHSMQNN 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
schlankNP_652526.1 homeodomain 75..131 CDD:238039 19/56 (34%)
TLC 135..334 CDD:214789 92/203 (45%)
cers2NP_001090742.1 homeodomain <84..128 CDD:238039 17/43 (40%)
TLC 131..332 CDD:214789 92/200 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10455
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D383274at33208
OrthoFinder 1 1.000 - - FOG0000327
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12560
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R648
SonicParanoid 1 1.000 - - X237
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.050

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