DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and Dlg5

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_017171686.1 Gene:Dlg5 / 71228 MGIID:1918478 Length:1931 Species:Mus musculus


Alignment Length:1072 Identity:209/1072 - (19%)
Similarity:354/1072 - (33%) Gaps:357/1072 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 ITVERES-----GCLGLTLRGGADYP-------LIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSL 236
            :..|||:     ..||..:..|.:.|       :.||.| ..|.: ..||::..|.|||:::|.|
Mouse   626 VEFERETEDIDLKALGFDMAEGVNEPCFPGDCGIFVTKV-DKGSI-ADGRLRVNDWLLRINDVDL 688

  Fly   237 IGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERPMNDKLGLVLCNYTAA 301
            |.|   :.:|.||...:..|..|:.:....|:...|   :.||.|.:                  
Mouse   689 INK---DKKQAIKALLNGEGAINMVVR
RRKSLGGKV---VTPLHINL------------------ 729

  Fly   302 VPASGSGSSTP-SSGEKIEESAGVFIASILPASIADRCGALSVGDQVLSIDDTMIEHTAFSPDE- 364
               ||...|.| .||..:|.  ||:.|:::|.|.|.:.|:|:|||::::|:...:::.:.:..| 
Mouse   730 ---SGQKGSRPQDSGISLEN--GVYAAAVVPGSPAAKEGSLAVGDRIVAINGIALDNKSLNECES 789

  Fly   365 ---------VMTIL----DTSTGRGYT---------QMQIMPAHALARRGHTTLGSPKYSFST-- 405
                     .:::|    .:|:..|..         :|....||....:.|......:::.||  
Mouse   790 LLRSCQDSLTLSLLKVFPQSSSWSGQNIFENIKDSDRMLSCRAHGPEVQAHNKRNLLQHNNSTQT 854

  Fly   406 -------LESRKSSTAGRQRQRFARK----SSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGL 459
                   ||.||..........|..|    ||.|:...||  |.::..|:.:.....|:..|.| 
Mouse   855 DIFYTDRLEDRKELGHSGGSSSFLHKPFSGSSSPVSPQAC--PSTSERSLNSFRSDTSAERGYG- 916

  Fly   460 GLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMY 524
                      |:|......::..||..|..|:..|.:.:|.|:                      
Mouse   917 ----------LVDMRSQRPLLSFETEVGPCGAVEVPLDKIDPE---------------------- 949

  Fly   525 SLDAAAMRQLLEGGSSRNG----ASNGTPANWLELEI--------------EFDMP------DAV 565
                         ||:..|    |..|:.:...:|.:              .|..|      |.:
Mouse   950 -------------GSNSGGTWPKAVLGSTSGPEKLSVYKKPKQRKSIFDPNTFKRPQTPPKIDYL 1001

  Fly   566 VPASGVF----------------------SVKLLRAGKCGLGLSVSGSSHGGLVISD-------- 600
            :|..|:.                      |:|....      |..|..|...||.|.        
Mouse  1002 LPGPGLTHSPQPSKRVGSLTPPKPPRRSDSIKFQHR------LETSSESEATLVGSSPSTSPPSA 1060

  Fly   601 --------------------VKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEEGRSQNP 645
                                |::.|..|..|   .||......:.|.........:.|.|:.:..
Mouse  1061 PPPSMDPSEPTHASPPRKARVRIASSYHSEG---DGDTSYLPAKKPCDEDLTSQKVDELGQKRRR 1122

  Fly   646 SHSSSDFTTLTIKRIVLP---------------------DFLPMS--------SP-IYSNCPASG 680
            ..|:..|.. .|..:|:|                     ::.|.|        :| :|.|.|:.|
Mouse  1123 PKSAPSFRP-KISPVVIPAQCLEEQECVPAIGELSPEGQEWSPYSPGHASRHGNPLLYPNRPSVG 1186

  Fly   681 I---NLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSV----- 737
            .   ::..|..|.:...:.:|:   |.:.:...|.|    .|.|        .||..||:     
Mouse  1187 TVPRSMTPGTTVGSILRNPIYT---VRSHRVLPCGS----PPVP--------RDAGSQSLSPSVQ 1236

  Fly   738 ------------------QLRSGSGSNGGNQAANSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQ 784
                              ::|:..|||....:|...|:  ::..:.|......||...|      
Mouse  1237 HQGRLSLDLSHRACSDYSEMRASQGSNSLPSSARLGSS--SNLQFKAERIKIPLTPRYP------ 1293

  Fly   785 EQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSKSSGSSLHQIIFT--------------- 834
             :...|.:....:..:|:. ||.....:...::.|..:::.|:|.:|...               
Mouse  1294 -RSVMGSDRGSLSHSECST-PPRSPLNIDTLSSCSQPQTTASTLPRIAVNPSSHGERRKDRPFVE 1356

  Fly   835 ----VRLEPKGGLLGITLAGSEDITKSITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLS 895
                |:::.....|||::...|  ...:.:|.:..|.|||:.| :..|||||..:     |:.|.
Mouse  1357 EPRHVKVQKGSEPLGISIVSGE--KGGVYVSKVTLGSIAHQAG-LEYGDQLLEFN-----GINLR 1413

  Fly   896 HATSLLQNL--GDLVD-----------LKILRSHDLANGSHLPQTQAIYAKVQ----RRPRSPSA 943
            .||.....|  |...|           :..|.||. .:.|||......::.:|    ..|..||.
Mouse  1414 SATEQQARLIIGQQCDTITILAQYNPHIHQLNSHS-RSSSHLDPAATPHSTLQGSSAGTPEHPSV 1477

  Fly   944 -----------NTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDGLYE 997
                       .|..:|:|.|...:.|   :....:..||:  |.:.|.::  |.|..:..|.. 
Mouse  1478 IDPLMEQDEGPGTPPAKQSASSTRSVG---DTTKKTPDPRI--VFIKKSQL--DLGVHLCGGNL- 1534

  Fly   998 RGVFINRIRSGGPADMCGLLKPFDRIMQVNEM 1029
            .|||:..:....||.....|.|.|.|::...:
Mouse  1535 HGVFVAEVEDDSPAKGPDGLVPGDLILEYGSL 1566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492 24/81 (30%)
PDZ_signaling 278..375 CDD:238492 25/111 (23%)
PDZ 496..>521 CDD:294084 2/24 (8%)
PDZ_signaling 571..658 CDD:238492 19/136 (14%)
PDZ_signaling 832..913 CDD:238492 23/112 (21%)
PDZ_signaling 973..1055 CDD:238492 14/57 (25%)
Dlg5XP_017171686.1 Takusan 129..213 CDD:368141
Smc <141..564 CDD:224117
PDZ_signaling 625..712 CDD:238492 26/90 (29%)
PDZ_signaling <741..800 CDD:238492 15/60 (25%)
PDZ 1357..1439 CDD:214570 23/89 (26%)
dbPDZ_assoc 1437..1512 CDD:374667 15/78 (19%)
PDZ 1513..1594 CDD:214570 16/59 (27%)
SH3_DLG5 1610..1672 CDD:212794
GuKc 1744..1920 CDD:214504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.