DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and PTPN3

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_011517190.1 Gene:PTPN3 / 5774 HGNCID:9655 Length:934 Species:Homo sapiens


Alignment Length:554 Identity:104/554 - (18%)
Similarity:172/554 - (31%) Gaps:199/554 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KSAALKQDQQQQQQQQQESHNNSFNGHHHPPTDTALAPMLSVDRAMSPAQSEDSGLAPERGTTYA 81
            |.:...||...:..|.:..|..|.:.:                   :||||            |.
Human   438 KGSLAPQDSDSEVSQNRSPHQESLSEN-------------------NPAQS------------YL 471

  Fly    82 TITLPRNALHLAITFAERNDLSYPP---VVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKV 143
            |               :::..|..|   ..||.:|.|.....|   |..|::    |.|.|.:..
Human   472 T---------------QKSSSSVSPSSNAPGSCSPDGVDQQLL---DDFHRV----TKGGSTEDA 514

  Fly   144 MNMLCAGGSDACPAIVEIEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGAD--YPLI 206
            ....|....:....:|                     |.:||.: |.|..|..|:||.|  .||:
Human   515 SQYYCDKNDNGDSYLV---------------------LIRITPD-EDGKFGFNLKGGVDQKMPLV 557

  Fly   207 VTHVRPHGPVYK-TGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCG--GH------------VSG 256
            |:.:.|..|... ..::..||:::.::...:...|..:....||..  .|            |..
Human   558 VSRINPESPADTCIPKLNEGDQIVLINGRDISEHTHDQVVMFIKASRESHSRELALVIRRRAVRS 622

  Fly   257 YTNLTIEYDVSVV-------------QSVEFSM---------GPLLIEIERPMNDKLGLVLC--- 296
            :.:...|.:::.:             .::|.||         |.:||:.|:....|.||.:.   
Human   623 FADFKSEDELNQLFPEAIFPMCPEGGDTLEGSMAQLKKGLESGTVLIQFEQLYRKKPGLAITFAK 687

  Fly   297 --------NYTAAVPASGSGSSTPSSGEKIEESAGVFIASILPAS------IADRCGALS----- 342
                    .|...:|...:......:.:.|..|   ::...:||:      ||.: |.|.     
Human   688 LPQNLDKNRYKDVLPYDTTRVLLQGNEDYINAS---YVNMEIPAANLVNKYIATQ-GPLPHTCAQ 748

  Fly   343 ----VGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYT---QMQIMPAHALARRG-HTTLGSP 399
                |.||.||:               :.:|.|.|.||.|   |....|...:...| |.     
Human   749 FWQVVWDQKLSL---------------IVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHI----- 793

  Fly   400 KYSFSTLESRKSSTAGRQRQRFARKSSLPLEN----------PACGTPGSTGGSMGTGGIHGSSS 454
                 ..:|...:.|...|:.....:....|:          |..|.|..:...:..  ::...|
Human   794 -----QCQSEDCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDSSDFLEF--VNYVRS 851

  Fly   455 LGMGLGLCRAESFPVLLDCSHGAG----IILSET 484
            |       |.:|.|||:.||.|.|    ::..||
Human   852 L-------RVDSEPVLVHCSAGIGRTGVLVTMET 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 13/67 (19%)
PDZ_signaling 183..254 CDD:238492 20/87 (23%)
PDZ_signaling 278..375 CDD:238492 24/122 (20%)
PDZ 496..>521 CDD:294084
PDZ_signaling 571..658 CDD:238492
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
PTPN3XP_011517190.1 B41 52..243 CDD:214604
FERM_N 54..117 CDD:286467
FERM_M 136..243 CDD:278785
FERM_C_PTPN4_PTPN3_like 237..330 CDD:270010
PDZ_signaling 529..616 CDD:238492 22/108 (20%)
PTPc 670..921 CDD:214550 49/247 (20%)
PTPc 693..920 CDD:238006 45/224 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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