DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and frmpd2

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_021335879.1 Gene:frmpd2 / 571843 ZFINID:ZDB-GENE-110315-2 Length:1116 Species:Danio rerio


Alignment Length:1194 Identity:236/1194 - (19%)
Similarity:378/1194 - (31%) Gaps:428/1194 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 HHHPPTDTALAP-------MLSVDRAMSPAQSEDSG-------LAPER----GTTYATITLPRNA 89
            :||   .||:.|       .::.|...:...|.||.       :..||    .:..:..|...|:
Zfish   152 NHH---QTAVLPRPEKTIRQMAEDVLQTEKPSNDSAHLIDRSQMVRERLRGASSQNSVWTQKGNS 213

  Fly    90 LHLAITFA--------ERND--LSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVM 144
            ...|..|:        .||.  :|..||      :.....|....|:|.    .|:..|:.:|: 
Zfish   214 TPSAADFSRFHSSHQRSRNSTYMSQSPV------LDRRRQFALRPDQLF----ASSFSLNERKM- 267

  Fly   145 NMLCAGGSDACPAIVE------IEYSLPECTVSQNSLCVTSKLAQITVERESG------CLGLTL 197
                   .|..|..:.      :...||...|| |....:|....:||...:|      | .:..
Zfish   268 -------KDTGPEFIRMLEEPLVVLELPNSIVS-NKGKSSSNQRDLTVLMPNGQNVLLKC-DVKC 323

  Fly   198 RGGADYPLIVTHVR--PH---GPVY-------------KTGRIKPGDRLLRVDNVSLIGKTLAEA 244
            ||...:.:||.|..  .|   |..|             |..::.|||           .|.:..|
Zfish   324 RGRDAFDMIVAHTNLVEHFYFGLAYSYDNEFFFLDNDTKISKVAPGD-----------WKKVPTA 377

  Fly   245 QQIIKCGGHVSGYTNLTIEYDVSVVQSV--EFSMGPLLIEIERP-MNDKLGLVLCN-----YTAA 301
            ..::          :..|:|.||.|..:  :|:.....:::.|. ::|:|   .||     :..|
Zfish   378 TFVL----------HFRIKYFVSDVSLLLNKFTRHQFYLQLRRDLLDDRL---QCNEETCLFLGA 429

  Fly   302 VPASGS-GSSTPSSGEKIEESAGVFIASILPASIADRC-----GALSVGDQVLSIDDTMIEHTAF 360
            :..... |.|.|....|.......:::..:...:|..|     ..|.|.:..:|.::..:|.   
Zfish   430 LALQAEFGDSLPEVYGKNYYQPEHYVSKSVVQKMAMPCLKEELLRLHVNNANMSAEEAELEF--- 491

  Fly   361 SPDEVMTILDTSTGRGYTQMQIMPA-----HALARR-----GHTTLG-------------SPKYS 402
                            ...:|.:|.     |.:||.     |...||             :.:.:
Zfish   492 ----------------LKSVQQLPEYGVLFHRVAREKKPVFGELLLGVCAKCITVYEVINNCRTA 540

  Fly   403 FSTLESRKSSTAGRQRQRF------ARKSSLPLENPA---------CGTPGSTGGSMG----TGG 448
            ..|...|.:|:....|::|      ::|..:.|...:         |.........|.    |..
Zfish   541 SLTFHWRDTSSITSTRRKFIIECSTSKKKHVFLTEKSKVAKYLCDLCSAQHKFHKEMSSRQLTHS 605

  Fly   449 IHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSG---C 510
            :....|:.....||||::                               ..|.||.||.|.   |
Zfish   606 LASEESIVQYAALCRAQN-------------------------------NEVNDSSADESMSKLC 639

  Fly   511 IQAGDRIVAINKMYSLDAAAMRQLLEGGSSRNGASN----GTPANWLEL-EIEFDMPD----AVV 566
            .....||.|..|:       .|.||:...|::....    .||....:: .:...:.|    |..
Zfish   640 EDIATRIEAKIKL-------QRDLLDNTGSQSPILQRSLCSTPKRGSDVPSVSSPLRDTPTGART 697

  Fly   567 PASGVFSVKLLRAGKCGLGLSVSGSSHG-----GLVISDVKMGSPAHRSGSLRSGDILLAVDQHP 626
            |...:..|.|.:..|.|||:.:.|....     |:.|:.|..||||.|.|.::.|..|::::|  
Zfish   698 PEREIICVSLKKDPKVGLGIVIVGEDTAGKLDLGIFIASVVPGSPADRDGRIKPGGRLISLNQ-- 760

  Fly   627 VQHFNVDALLKEEGRSQNPSHSSSDFTTLTIKRIVLPDFLPMSSPIYSNCPASGINLGMGMGVST 691
                     |..||.|.:.:                .|.:.                      |:
Zfish   761 ---------LSLEGMSFSEA----------------ADIMQ----------------------SS 778

  Fly   692 STDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWS 756
            |.|.:|..|                   ||              ..|.:.|.            |
Zfish   779 SNDVELIIS-------------------QP--------------KAQCKRGG------------S 798

  Fly   757 TGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYG------S 815
            ..:|.|||      :|.:|.|.:.....|      .|:...||..|   |...|:::.      :
Zfish   799 VSLNERSY------ESQSTILADGRTGDE------FLDELVSVMMT---PKASNRLHVPEVRIIN 848

  Fly   816 AASSSSKSSG-SSLHQIIFTVRLEPKGGLLGITLAGSEDI---TKSITISGLVEGGIAHKNGQIH 876
            |....|:|:. .||....|||.|...||.|||::||..:.   ...|.|..||.||:|.::|:|.
Zfish   849 AQDDYSRSASLISLRPEEFTVTLMKSGGSLGISIAGGVNTGLRYGGIYIKSLVSGGVAEQDGRIQ 913

  Fly   877 VGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKVQRRPRSP 941
            .||:||.:|...:||.....|...|...|::|.|.:.|.    .||.|          |:.|.||
Zfish   914 TGDRLLEVDGIRLQGFTDQQAAECLARTGEVVGLVLERD----GGSML----------QQGPGSP 964

  Fly   942 S------------ANTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDG 994
            .            |.|:|.|...:........:       |||             ||.|...|.
Zfish   965 QLRNTLSICTPGPAGTQARKSCPAITMTRPFNI-------KPR-------------DYSFVSDDN 1009

  Fly   995 LYE------------------------RGVFINRIRS---GGPADMCGLLKPFDRIMQVNEMKTQ 1032
            :.|                        ||..: ||::   |.||:..|.::..|.|:.:|....:
Zfish  1010 IQEVTLKKRLNGLGFSFFISELNTSRDRGSIV-RIKTLFPGQPAEESGRIQEGDVILSINGEPLK 1073

  Fly  1033 DFDCCLTVPLIAAAGDKIEMIMQR 1056
            .......:.|:..:..::.|::.|
Zfish  1074 GLSYQHVLQLLRNSPSEVRMLLCR 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 15/74 (20%)
PDZ_signaling 183..254 CDD:238492 18/94 (19%)
PDZ_signaling 278..375 CDD:238492 16/108 (15%)
PDZ 496..>521 CDD:294084 10/27 (37%)
PDZ_signaling 571..658 CDD:238492 23/91 (25%)
PDZ_signaling 832..913 CDD:238492 32/83 (39%)
PDZ_signaling 973..1055 CDD:238492 18/108 (17%)
frmpd2XP_021335879.1 PKc_like 5..154 CDD:328722 0/1 (0%)
B41 305..506 CDD:214604 42/244 (17%)
PH-like 502..603 CDD:327399 15/100 (15%)
PDZ_signaling 702..786 CDD:238492 28/132 (21%)
PDZ 865..953 CDD:214570 33/91 (36%)
PDZ_signaling 1010..1096 CDD:238492 14/86 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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