Sequence 1: | NP_572285.2 | Gene: | Grip / 50391 | FlyBaseID: | FBgn0029830 | Length: | 1058 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948202.1 | Gene: | Ptpn13 / 498331 | RGDID: | 1563360 | Length: | 2465 | Species: | Rattus norvegicus |
Alignment Length: | 1159 | Identity: | 241/1159 - (20%) |
---|---|---|---|
Similarity: | 384/1159 - (33%) | Gaps: | 374/1159 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 QQQQQQQESHNNSFNGHHHPPTDTALAPMLSVDRAMSPAQSE--DSGLAPERGTTYATITLPRNA 89
Fly 90 LHLAITFAERNDLSYPPVVGS-LNPVGHA-ADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGS 152
Fly 153 DACPAIVEIEYSLPECTVSQNSL-------------CVTSKLAQITV-----ERESGCLGLTLRG 199
Fly 200 GA-----DYPLIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTN 259
Fly 260 LTIEYDVSVVQS-------------VEFSMGPLLIEIERPMNDKLGLVLCNYTAAVPASGSGSST 311
Fly 312 PSSGEKIEESAGVFIASILPASIADRCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTG-R 375
Fly 376 GYTQMQIMPAHAL---------------------ARRGHT------------TLGSPKYSFSTLE 407
Fly 408 SRKSSTAGRQRQRFARKSS-------LPLENPACGTP-----GSTGGSMGTGGIHGSSSLGMGLG 460
Fly 461 LCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYS 525
Fly 526 LDAAAMRQ--------------LLEGGSS-----RNGASNGTPANWLELEIEFDMPD-------- 563
Fly 564 ----AVVPASGVFSVKLLRAGKCGLGLSVSGSSH------GGLVISDVKM--GSPAHRSGSLRSG 616
Fly 617 DILLAVDQHPVQHFNVDALLKEEGRSQNPSHSSSDFTTLTIKRIVLPDFLPMSSPIYSNC-PASG 680
Fly 681 INLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRT--PQPDYFRVPSMDDASLQSVQLRSGS 743
Fly 744 GSNGGNQAANSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCTALPPPM 808
Fly 809 ENKVYGSA-ASSSSKSSGSSLHQIIFTVRLEPKGGLLGITLAGSEDITKSITISGLVEGGIAHKN 872
Fly 873 GQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKVQRR 937
Fly 938 PRSPSANTEASKESGSGNANGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDGLYERGVFI 1002
Fly 1003 NRIRSGGPADMCGLLKPFDRIMQVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQR 1056 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grip | NP_572285.2 | PDZ | 82..147 | CDD:294084 | 13/66 (20%) |
PDZ_signaling | 183..254 | CDD:238492 | 26/80 (33%) | ||
PDZ_signaling | 278..375 | CDD:238492 | 16/97 (16%) | ||
PDZ | 496..>521 | CDD:294084 | 8/24 (33%) | ||
PDZ_signaling | 571..658 | CDD:238492 | 26/94 (28%) | ||
PDZ_signaling | 832..913 | CDD:238492 | 15/80 (19%) | ||
PDZ_signaling | 973..1055 | CDD:238492 | 21/81 (26%) | ||
Ptpn13 | XP_038948202.1 | KIND | 3..190 | CDD:214801 | |
FERM_F1_PTPN13 | 564..659 | CDD:340715 | |||
B41 | 566..774 | CDD:214604 | |||
PH-like | 770..870 | CDD:418428 | |||
PDZ_signaling | 1082..1166 | CDD:238492 | 28/95 (29%) | ||
PTN13_u3 | 1168..1356 | CDD:406898 | 38/219 (17%) | ||
PDZ_signaling | 1356..1444 | CDD:238492 | 25/116 (22%) | ||
PDZ | 1493..1583 | CDD:214570 | 27/115 (23%) | ||
PDZ_signaling | 1769..1848 | CDD:238492 | 22/103 (21%) | ||
PDZ_signaling | 1873..1945 | CDD:238492 | |||
PTPc-N13 | 2216..2449 | CDD:350445 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0792 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |