DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and dlg1b

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:XP_009295207.1 Gene:dlg1b / 497648 ZFINID:ZDB-GENE-050222-3 Length:990 Species:Danio rerio


Alignment Length:811 Identity:156/811 - (19%)
Similarity:258/811 - (31%) Gaps:308/811 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 IEESAGVFIASILPASI------------ADRCGAL-SVGDQVLSI---DDTMIEHTAFSPDEVM 366
            |:....:|.:::..|.|            .:|||.| .|.|.:..:   |.:.|:.|..:.| .:
Zfish    34 IQRVIDIFQSNLFQALIDIQEFYEVTLLDTERCGELVKVPDALPPVNLWDFSSIQSTTVTSD-TL 97

  Fly   367 TILDTSTGRGYTQMQIMPAHALARRGHTTL-----------GSPKYSFSTLESRKSSTAGRQRQR 420
            ..|.||........:|:...|.|:...:.|           |||:...|  ......|.|.:..:
Zfish    98 PSLSTSIEDSPLLNEILHVLAKAKSSSSDLDQKYRHQDEDTGSPQEPSS--PQFTDDTPGPELVQ 160

  Fly   421 FARKSSLPLENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSE-- 483
            .|.||...:||                 :||..: ...:...:.||...:.|   |...::.|  
Zfish   161 VAEKSLSQIEN-----------------VHGFVA-HSHISPMKVESLECIFD---GPSPVVKEES 204

  Fly   484 ------TVSGSGGSGAVAIAQ------------IVPDSVADRSGCI------QAGDRIVAINKMY 524
                  .:|.......|::.|            ::|.|.......:      ||....|.:| ..
Zfish   205 PPSPSTPLSNPYPQSPVSVQQTDAVPPSTLIIPVIPISTVPTEPAVISPSTSQANPPPVVVN-TE 268

  Fly   525 SLDAAAMRQLLEGGSSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVS 589
            |||:|..             .|||.|::...||                  .|..|..|||.|::
Zfish   269 SLDSAPY-------------VNGTEADFEYEEI------------------TLERGNSGLGFSIA 302

  Fly   590 GSS---HGG----LVISDVKMGSPAHRSGSLRSGDILL---AVDQHPVQHFNVDALLKEEGRSQN 644
            |.:   |.|    :.|:.|..|..|.:.|.||..|::|   .||...|.|......|||.|    
Zfish   303 GGTDNPHIGEDPSIFITKVIPGGAAAQDGRLRVNDVILRVNEVDVRDVTHSKAVEALKEAG---- 363

  Fly   645 PSHSSSDFTTLTIKRIVLPDFLPMSSPIYSNCPASGINLGMGMGVSTSTDHDLYSSAYVTAGKYA 709
                       ::.|:                                         ||...|.|
Zfish   364 -----------SLVRL-----------------------------------------YVRRRKSA 376

  Fly   710 DCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWSTGVNSRSYVAPPNTQSLT 774
                                 ...:..::|..|                                
Zfish   377 ---------------------SEKVMEIKLIKG-------------------------------- 388

  Fly   775 TELPEEEDEQEQMYPGYELNRYASVDCTALPPPMENKVYGSAASSSSKSSGSSLHQIIFTVRLEP 839
                                                                            |
Zfish   389 ----------------------------------------------------------------P 389

  Fly   840 KGGLLGITLA---GSEDI--TKSITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATS 899
            ||  ||.::|   |::.|  ..||.::.::|||.|||:|::.:||:|||::...::.:...||.:
Zfish   390 KG--LGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKLLAVNSSCLEEVTHEHAVT 452

  Fly   900 LLQNLGDLVDLKILRSHDL-ANGSHLPQ--TQAIYAKVQRRPRSPSANTE--ASKESGSGNANGG 959
            .|:|..|:|.||:.:.:.: .|.|..|.  |.:....::.....||..::  ....||..:....
Zfish   453 ALKNTPDVVYLKVAKPNSVFMNDSFAPPDITNSYSQHMENHISPPSYLSQPLPPVHSGRFSPTPK 517

  Fly   960 GAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDGLYERGVFINRIRSGGPADMCGLLKPFDRIM 1024
            ..|..:..:.:||  .|.|::...  ..||::..|....|:||:.|.:|||||:||.|:..||::
Zfish   518 TTVGDDDVTREPR--KVVLHRGTT--GLGFNIVGGEDGEGIFISFILAGGPADLCGELRKGDRLV 578

  Fly  1025 QVNEMKTQDFDCCLTVPLIAAAGDKIEMIMQ 1055
            .||.:..:..........:..||..:.::.|
Zfish   579 SVNGIDLRGATHEQAAAALKNAGQTVTIVAQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 17/72 (24%)
PDZ 496..>521 CDD:294084 6/42 (14%)
PDZ_signaling 571..658 CDD:238492 26/96 (27%)
PDZ_signaling 832..913 CDD:238492 30/85 (35%)
PDZ_signaling 973..1055 CDD:238492 23/81 (28%)
dlg1bXP_009295207.1 L27_1 4..62 CDD:286187 4/27 (15%)
MAGUK_N_PEST 130..286 CDD:287565 35/192 (18%)
PDZ_signaling 287..371 CDD:238492 30/157 (19%)
PDZ_signaling 380..466 CDD:238492 32/183 (17%)
PDZ_assoc 467..530 CDD:287558 9/62 (15%)
PDZ_signaling 529..607 CDD:238492 25/81 (31%)
SH3_DLG1 647..713 CDD:212964
Guanylate_kin 799..977 CDD:279019
GuKc 810..977 CDD:214504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23119
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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