DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip and bbg

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster


Alignment Length:1249 Identity:260/1249 - (20%)
Similarity:399/1249 - (31%) Gaps:430/1249 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QQQESHNNSFNGHH-------------HPPTDTALAPML---SVDRAMS-PAQSEDSG----LAP 74
            ::.||...:.:.||             :.|..|.::..:   |.:.|.: ||..:..|    |:.
  Fly  1546 REHESDLGTLSNHHSNISSISGINASSNIPAATLISSSIKKTSTEAATTKPAAPQIPGKMELLSS 1610

  Fly    75 ERGTTYATITLPRNALHLAITFAE---RNDLSY--PPVVGSLNPVGHAADFLAPGDRLHQIDGIS 134
            ..|||..|.|...: ||.|.|..:   ::.|||  ||....|.|.||.   ..|           
  Fly  1611 NTGTTTTTTTATHH-LHQATTTKQLLVQDYLSYASPPTYSRLPPDGHE---FPP----------- 1660

  Fly   135 TIGLSNQKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRG 199
              ..|...:|:      |.......|:.|.:.                               :|
  Fly  1661 --NFSEPLIMH------SHPLKVTTELSYEIQ-------------------------------KG 1686

  Fly   200 GADY----PLIVTHVRPHGP-------VYKTG---RIKPGDRLLRVDNVSLIGKTLAEAQQIIKC 250
            |.|.    ||..|     ||       ||:..   .::|...|.|....||.|.|..:.....|.
  Fly  1687 GKDESSAPPLPKT-----GPPATVPRKVYRQDLVINVEPAPSLTRDYQRSLSGGTPRKPSDWRKD 1746

  Fly   251 GGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERPMNDKLGLVLCN--------YTAAVPASGS 307
            .                              :.|:.:.||:.:...|        ..|..|.|.|
  Fly  1747 E------------------------------KSEKSVRDKIAMFSSNNELDAIPPAPATAPISSS 1781

  Fly   308 GSSTP--SSGEKIEESAGVFIASILPASIADRCGALSVGDQVLSIDDTMIE----------HTAF 360
            .:..|  .|.|.:.:|..   :|..| |:..|  |:||.    :::|...:          |.|.
  Fly  1782 FTRKPLNRSSENLLDSCS---SSSAP-SLKTR--AMSVE----NLNDVQRQYQLAKQLPQLHVAD 1836

  Fly   361 SPDEVMTILDTSTGRGYTQMQIMPAHA-LARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARK 424
            |    |..|:|:|.        .|::| |.||.|   |.   |:|:...|:.|.:|.......||
  Fly  1837 S----MYSLNTATP--------TPSYASLPRRSH---GG---SYSSGVERRISFSGEGGDAANRK 1883

  Fly   425 SSLP--LENPACGTPGSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSG 487
            :::.  ||                   ....||....||...|. |.||:.......|.|:..:.
  Fly  1884 AAITNILE-------------------QRRRSLSKLRGLVIPER-PQLLEPILDLPEIKSQVKAA 1928

  Fly   488 SGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAINKMYSLDAAAMRQLLEGGSSRNGA----SNGT 548
            ||.....:.......|..:|:..:.||.   |.|...|:.....|:.||...|:..|    ::.|
  Fly  1929 SGEDSTDSGLGESHRSTVNRNCQLGAGG---AANNYRSILNTNQRRPLEQQLSQPPAKPPRTSLT 1990

  Fly   549 PANWLELEIEFDMP--DAVVPASGVFS-----------VKLLRAGKCGLGLSVSGSSHGGLVISD 600
            |.....:.|....|  |.......|||           ..|.|........|:: ||:...:.|.
  Fly  1991 PLQPRSMMIPPPPPPLDQESDTDSVFSHTARVATPPEKFALTRTLSSETNTSIA-SSNTSTLTSG 2054

  Fly   601 VKMGSPAHRS--GSLRSGDILLAVDQHPVQHFNVDAL--------------LKEEGRSQNPSHSS 649
            ...||.|..|  ||..:.|:...|.:..|.:....||              .|..|:.::...:.
  Fly  2055 SSAGSQASCSSLGSTPAVDLTRRVLKSQVINGEAVALSSRKSILASAKCRSAKSRGQEEDNDSTD 2119

  Fly   650 SDFTTLTIKRIVLPDFLPMSSPIYSNCPASGINLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSL 714
            .:..:|..:|:     .|:||   .......|.||..:.|    |..:..:|||......|..|.
  Fly  2120 GEACSLANRRM-----KPISS---YKLQQQQIQLGKQLVV----DKLINVAAYVELTSDTDDSSR 2172

  Fly   715 KSRTPQPDYFRVPSM--DDASLQSVQLRSGSGSNGGNQAANSWSTGVNSRSYVAP---------P 768
            :|.||.    ::.:|  |:.       |..|.....||.|......|  :..|.|         |
  Fly  2173 RSDTPA----KISAMFIDEE-------RKASFKGDPNQQAKVKVEQV--KPMVLPMLLPSAKREP 2224

  Fly   769 NTQSLTTELPEEEDE------QEQMY----------PGYELNRYASVD----------------C 801
            ..|..|.||.|:.:.      |.|.:          |.:|  |::|:|                .
  Fly  2225 LKQQTTAELREKFERSAAAQAQTQNHSPVIHKVTQKPHHE--RFSSLDSLASSSSGVSSTTQNVS 2287

  Fly   802 TALPPPMENKVYGSAASSSSKSSGSSLHQI--------------IFTVRLEPKGGLLGITLAGSE 852
            |......|...:.|..|:.|..:...:.||              |..::.|.....:||||||..
  Fly  2288 TTQETATEFGSFSSLGSNQSLITAQDVQQIVEEADPPLKTPEAFIIVLQRENPESSIGITLAGGS 2352

  Fly   853 DI-TKSITISGLVEGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQ-------------- 902
            |. .|.|||..::....|.|:|::..||::||::..|::|:....:.|:|:              
  Fly  2353 DYEAKEITIHKILSNTPAAKDGRLKKGDRILAVNGMSMRGLTHRESISVLKTPRPEVVLVVTRSE 2417

  Fly   903 ------------NLGDLVDL----------------KILRSHDL------------------ANG 921
                        :||.|..|                |..||.||                  :.|
  Fly  2418 SLVVKALTKKRSSLGSLSSLNEKPTELDYERKRNYHKASRSLDLDLDLVSNEAGESPVATTPSTG 2482

  Fly   922 S---------HLPQTQAIYAKVQRR---PRSPSANTEASK------------------ESGSGNA 956
            |         |....:|..|.::.|   .|..:|....|:                  ::....|
  Fly  2483 SVSPPQPASLHDEDAEATIAGIRARRQLSRGDAAKLSTSELLERAAEARNAIAAEIRAQAEDAAA 2547

  Fly   957 NGGGAVNGNSGSGKPRVFHVTLYKDKVYDDYGFSVSDG----LYERGVFINRIRSGGPADMCGLL 1017
            :||||          |.  |.:.||..  ..|||:..|    |..|.:.:.::..||.|.....:
  Fly  2548 SGGGA----------RC--VEIVKDSC--GLGFSIEGGFDSPLGNRPLIVKKVFMGGAAQKTNQV 2598

  Fly  1018 KPFDRIMQVNEMKT 1031
            :..|.|:.:|...|
  Fly  2599 RNGDEILSINGAST 2612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 18/69 (26%)
PDZ_signaling 183..254 CDD:238492 18/84 (21%)
PDZ_signaling 278..375 CDD:238492 27/116 (23%)
PDZ 496..>521 CDD:294084 5/24 (21%)
PDZ_signaling 571..658 CDD:238492 23/113 (20%)
PDZ_signaling 832..913 CDD:238492 29/123 (24%)
PDZ_signaling 973..1055 CDD:238492 16/63 (25%)
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492 24/81 (30%)
PDZ_signaling 2553..2634 CDD:238492 17/64 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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