DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and dysc

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001261810.1 Gene:dysc / 39533 FlyBaseID:FBgn0264006 Length:1254 Species:Drosophila melanogaster


Alignment Length:1116 Identity:206/1116 - (18%)
Similarity:320/1116 - (28%) Gaps:505/1116 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 AQSEDSGLAPERGTTYATITLPR------NALHLAITFA------ERND-------LSYPPVVGS 110
            |.:...||.|..|.|.::.::|.      :..||..:.|      |..|       :|.||  ||
  Fly    47 AAAASFGLGPSMGGTQSSSSVPTGGSAGLSGHHLRSSGAPGPSSFEAEDIGMAFGMISPPP--GS 109

  Fly   111 LNPVGHAADFLAPGDRLHQIDGISTIGLSNQKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSL 175
            ...||.:|  .|.|.|:    |.||..|..        |||...      :.||.|         
  Fly   110 GPYVGSSA--AAGGSRV----GNSTSSLRG--------AGGRSG------LYYSPP--------- 145

  Fly   176 CVTSKLAQITVERESGCLGLTLRGGADYPLIVTHVRPHGPVY---------KTGRI--------- 222
                                    |..|.::   .|||.|.|         |.|.:         
  Fly   146 ------------------------GTSYTIV---ERPHSPHYYFNSAGVPTKGGSLPGRGSAYLS 183

  Fly   223 -KPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYTNLTIEYDVSVVQSVEFSMGPLLIEIERP 286
             .|...:......:|...|.|..:.:   |.|.|...|.                       :||
  Fly   184 SSPASHMAAGTAGTLPTSTAASGRSM---GQHASSNGNK-----------------------KRP 222

  Fly   287 MNDK--LGLVLCNYTAAVPAS------------------GSGSSTPSSGEKI------------- 318
            ::.:  |.:.....:::||.|                  ...||.||:..:|             
  Fly   223 ISPEQVLRMFGATQSSSVPTSSYHYSNGGTRDRDRTGRRSPASSPPSTTHQIYRDRERERDRSVP 287

  Fly   319 ------------------------------EESAGVFIASILPASIADRCGALSVGDQVLSIDDT 353
                                          :...||:|:.|...|:|:|.| |..||.:|.::.|
  Fly   288 NIHELTTRTVSMSRDQQIDHGFGICVKGGKDSGLGVYISRIEENSVAERAG-LRPGDTILEVNGT 351

  Fly   354 MIEHTAFSPDEVM---------------------TILDTSTGRG---------YTQM------QI 382
              ..|:.:.:|.:                     |:..|:...|         |..|      |.
  Fly   352 --PFTSINHEEALKRCVQILKSSRQISMTVRAPPTLNSTAPLHGFGPPSRDPMYASMAPPLHPQN 414

  Fly   383 MPAHALARRGHTTLGSP---KYSFSTLESRKSST----AGRQRQR--FARKSSLPLENPACGTPG 438
            ..|.|.|....:..|.|   ..|:.....|.:|.    .||:.:|  ..|:..|.:|      ||
  Fly   415 QAAAAAAAAAASGAGLPFRQTCSWMDRHGRPASPPMEYGGRRSERRDRIRRVELLIE------PG 473

  Fly   439 STGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDS 503
            .:.|.|..||:                        .:|.||.    |:|           :..||
  Fly   474 QSLGLMIRGGV------------------------EYGLGIF----VTG-----------VDKDS 499

  Fly   504 VADRSGCIQAGDRIVAINKMYSLDAA---AMRQL----------LEGGSSRNGASNGTPANWLEL 555
            |||||| :..||.|:.:|....||..   |:.||          .:.|...:..::         
  Fly   500 VADRSG-LMIGDEILEVNGQSFLDVTHDEAVGQLKYHKRMSLVIRDVGKVPHSCTS--------- 554

  Fly   556 EIEFDMPDAVVPASGVFSVKLLRAGKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRSGDILL 620
             ||.:..||..|.                                   |:.|.|.|.:.:     
  Fly   555 -IEMEPWDAYSPT-----------------------------------GTRARRKGQIAT----- 578

  Fly   621 AVDQHPVQHFNVDALLKEEGRSQNPSHSSSDFTTL-------TIKRIVLPDFLPMSSPIYSNCPA 678
                          :::|:.||..|.|   .|.:|       :.|.:.:..|:            
  Fly   579 --------------MVEEKARSLLPRH---HFASLSYYIAEYSAKAMTIDAFV------------ 614

  Fly   679 SGINLGMGMGVSTSTDHDLYSSAYVTA-----GKYADCVSLKSRTP-QPDYFR--------VP-S 728
             .:.|.|   :.|...|.|.:......     .:|.:.|..:.|.| ..|..|        :| :
  Fly   615 -AVLLEM---LDTYEKHTLVTEIRELVFPEDRTRYDELVYRRERDPYSVDRHRRKGDPARDLPVT 675

  Fly   729 MDDASLQSVQLRSGSGSNG----------------------------GNQAANSWSTGVN-SRSY 764
            .||..:.:...||.|..:|                            .:|.|:.:.||.| |.|.
  Fly   676 ADDLEIIAATGRSPSSDSGLGMTVTDIYKRPALQLPHRPMSAGPILHRSQPASHYQTGSNQSSSS 740

  Fly   765 VAPPNTQSLTTE-----------------------------------LPEEEDEQEQMYPGYELN 794
            ::||..|....:                                   ..:.:|.|:|.| |.:.:
  Fly   741 LSPPQQQQQQQQHYQPHHASLRHLGGIGGNVGSGRHHHHPLGPSQLKFRQTKDNQQQEY-GCDEH 804

  Fly   795 RYASVDCTALP---PPMENKVYGSAASS-SSKSSGSSL--------HQIIFTVRLEPKGG----- 842
            |......|.||   |..|.::....:.| ..|..|.:|        ||.:..:..|..||     
  Fly   805 RTRRGSETLLPEYEPDAEQELATKLSRSFDMKEEGGTLLGDKGVRRHQSMQRLSAEQNGGSTTEQ 869

  Fly   843 -------------------------LLGITLAGSEDITKSI-TISGLVEGGIAHKNGQIHVGDQL 881
                                     :|||.:.|..:....: .|..:.|.|.|.:.|.:.||..:
  Fly   870 THEHNPNVVPDHRGNLHITVKKTKPILGIAIEGGANTKHPLPRIINIHENGAAFEAGGLEVGQLI 934

  Fly   882 LAIDEHSVQGM 892
            |.:|...|:|:
  Fly   935 LEVDGTKVEGL 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 21/83 (25%)
PDZ_signaling 183..254 CDD:238492 14/89 (16%)
PDZ_signaling 278..375 CDD:238492 28/180 (16%)
PDZ 496..>521 CDD:294084 11/24 (46%)
PDZ_signaling 571..658 CDD:238492 11/93 (12%)
PDZ_signaling 832..913 CDD:238492 18/92 (20%)
PDZ_signaling 973..1055 CDD:238492
dyscNP_001261810.1 PDZ_signaling 294..380 CDD:238492 15/88 (17%)
PDZ_signaling 466..543 CDD:238492 30/122 (25%)
HN_L-whirlin_R2_like 573..653 CDD:259823 17/117 (15%)
PDZ_signaling 886..971 CDD:238492 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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