DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and inaD

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster


Alignment Length:795 Identity:154/795 - (19%)
Similarity:245/795 - (30%) Gaps:307/795 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 GSGSSTPSSGEKIEESAGVFIASILPASIADRCGALSVGDQVLSID------------------- 351
            |....:|::     ::.|:||..|:|.|.|..||.|.|||::||::                   
  Fly    47 GEVKDSPNT-----KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEA 106

  Fly   352 DTMIE---HTAFSPDEVMTILDTST--------------------------GRGYTQMQIMPA-- 385
            |..||   .|....||.....|..:                          |:|..|.|.|..  
  Fly   107 DFKIELEIQTFDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNASGGQGMGQGQGQGQGMAGMN 171

  Fly   386 --HALARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTP----------- 437
              .::.:|..|...|.:...|...............|...::...::..:.|..           
  Fly   172 RQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGYEIDRASAGNCKLNKQEKDRDK 236

  Fly   438 ------GSTGGSMGTGGIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSE---------TVSG 487
                  |.|...:       :....|...|.|.|   |..|.|...|:.|:.         .|:|
  Fly   237 EQEDEFGYTMAKI-------NKRYNMMKDLRRIE---VQRDASKPLGLALAGHKDRQKMACFVAG 291

  Fly   488 SGGSGAVAIAQIVPDSVADRSGCIQAGDRIVAIN-----KMYSLDAAAMRQLLEGG------SSR 541
            ...:||:....|.|            ||.||.:|     ....|:|:|:.:.::|.      |.|
  Fly   292 VDPNGALGSVDIKP------------GDEIVEVNGNVLKNRCHLNASAVFKNVDGDKLVMITSRR 344

  Fly   542 NGASNGT--------PANWLELEIEFD-MPDAVVPASGVFSVKLLRAGKCG-LGLSVSGSSH--- 593
            .....|.        |....|.:..|| .|.|          :.::..|.| ||:.|....|   
  Fly   345 KPNDEGMCVKPIKKFPTASDETKFIFDQFPKA----------RTVQVRKEGFLGIMVIYGKHAEV 399

  Fly   594 -GGLVISDVKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVD---ALL------------------ 636
             .|:.|||::.||.|..:| ::.||:||||:|......|.|   .||                  
  Fly   400 GSGIFISDLREGSNAELAG-VKVGDMLLAVNQDVTLESNYDDATGLLKRAEGVVTMILLTLKSEE 463

  Fly   637 -----------------KEEGRSQNPSHSSSDFTTLTI---KRIVLP---DFLPMSSPIYSNCPA 678
                             |||.:.|.|:       |..|   |:|::.   :..||...:   |..
  Fly   464 AIKAEKAAEEKKKEEAKKEEEKPQEPA-------TAEIKPNKKILIELKVEKKPMGVIV---CGG 518

  Fly   679 SGINLGMGMGVSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGS 743
            ...::..|..::     .:|....|.|.|                 |:...|..          .
  Fly   519 KNNHVTTGCVIT-----HVYPEGQVAADK-----------------RLKIFDHI----------C 551

  Fly   744 GSNGGNQAANSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYELNRYASVDCT---ALP 805
            ..||                  .|.:..|:||     ....:..:..||    .:|..|   |.|
  Fly   552 DING------------------TPIHVGSMTT-----LKVHQLFHTTYE----KAVTLTVFRADP 589

  Fly   806 PPMENKVYGSAASSSSKSSGSSLHQIIFTVRLEPKGGL-LGITLAGSEDITKSITISGLVEGGIA 869
            |.:|.                      |.|.|..|.|. ||::|:.:|   ...||:.|::|...
  Fly   590 PELEK----------------------FNVDLMKKAGKELGLSLSPNE---IGCTIADLIQGQYP 629

  Fly   870 HKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRSHDLANGSHLPQTQAIYAKV 934
            ..:.::..||.:...:..:::|:|.....:|.:.....|.:::                      
  Fly   630 EIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV---------------------- 672

  Fly   935 QRRPRSPSANTEASK 949
             .||: |:..|||.|
  Fly   673 -TRPK-PTLRTEAPK 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084
PDZ_signaling 183..254 CDD:238492
PDZ_signaling 278..375 CDD:238492 24/116 (21%)
PDZ 496..>521 CDD:294084 6/24 (25%)
PDZ_signaling 571..658 CDD:238492 32/132 (24%)
PDZ_signaling 832..913 CDD:238492 19/81 (23%)
PDZ_signaling 973..1055 CDD:238492
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 20/72 (28%)
PDZ_signaling 259..340 CDD:238492 23/95 (24%)
PDZ_signaling 377..457 CDD:238492 25/80 (31%)
PDZ_signaling 500..584 CDD:238492 20/145 (14%)
PDZ_signaling 597..672 CDD:238492 18/77 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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