DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and Dlg5

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster


Alignment Length:827 Identity:170/827 - (20%)
Similarity:276/827 - (33%) Gaps:243/827 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGCVPGKSAALKQDQQQQQQQQQE------SHNN-------SFNGHHHPPTDT-------ALAPM 55
            ||....:|:.|.......|||.|:      .|::       .::.|||..|:.       ..||.
  Fly  1063 GGRGNRRSSPLTLPSPPPQQQLQQLPAATAPHDSVGIPTDLDYHPHHHTQTNAMPHPHPHPHAPY 1127

  Fly    56 LSVDRAM--SPAQSEDSGLAPERGTTYATITLPRNALHLAITFAERNDLSYPPV----------- 107
            |.....:  .|......|::...|..|...|.||...:..:...     |.|.|           
  Fly  1128 LDYGHGLGIGPYMGVGGGVSGVGGAIYEGGTFPRKKDNQRLRIP-----SNPSVASKSSSMVKNS 1187

  Fly   108 --------VGSLNPVGHAADFLAPGDR---------LHQIDGI---------STIGLSN------ 140
                    |.|..||...:...:..||         :|...|.         |:||:..      
  Fly  1188 SGSIDHHYVTSTGPVSGGSMSASSSDRAPMSLMSSSIHNSYGANIAGGNGTGSSIGVGGGGGGGS 1252

  Fly   141 -------QKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLR 198
                   |..:.:|..||..:         ......|..:.|| ...|.::|:::....||:|::
  Fly  1253 GRGSPMPQVHVEVLSHGGGGS---------GKRNSNVPADFLC-PGDLRRVTIDKRDKSLGITIQ 1307

  Fly   199 ----GGADYPLIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQIIK-CGGHVSGYT 258
                ||.   :.|:.|.......:.| ::.||:||.|..:::...|...|..::: ||   ..:|
  Fly  1308 CNNNGGG---IFVSTVADKSTAMRAG-LQVGDQLLEVCGINMRAATQEIAANVLRQCG---DSFT 1365

  Fly   259 NLTIEYDVSVVQSVEFSMGPLLIEIERPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAG 323
            .| ::|:.....|:|:. |...:|.|.|:|.                 |||.||.:..:......
  Fly  1366 ML-VQYNPEKFPSIEYE-GAHNLEPESPINH-----------------SGSPTPRNSPRPPARNS 1411

  Fly   324 VFIASILPASIADRCGA------LSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQI 382
            :|...:.|.:.:.|.|:      .|:.||  |..|::...:..|                 ..|.
  Fly  1412 LFPLPMQPQAPSTRPGSRAPLSHQSIKDQ--SFTDSLENQSDIS-----------------SSQD 1457

  Fly   383 MPAHALARRGHTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSLPLENPACGTPGSTGGSMGTG 447
            ||:.|.     ||..:...:.||:...:.            |.|||  .|....|..|   :...
  Fly  1458 MPSSAA-----TTTTTTASATSTVYDEEP------------KPSLP--PPPASVPAET---LRYV 1500

  Fly   448 GIHGSSSLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGG--SGAVAIAQIVPDSVADRSGC 510
            .:|...|..:|:.|.....          .||.:.:...||..  :|.....||:..:..|.||.
  Fly  1501 TLHMDKSKNLGIKLFGGNK----------VGIYVHDVAVGSPSDHAGIRKGDQILEYNGVDLSGV 1555

  Fly   511 I--QAGDRIVAI---------NKMYSL----DAAAMRQLLEGGSSRNGASNGTPANWLELEIEFD 560
            .  ||.:.|..:         ||:::|    |.......:..|..|.|..|.....:::.|:.: 
  Fly  1556 TAEQAANEISKLTDTVTMLVQNKLHTLKQIKDEPGDSFYIRVGFDRTGELNEDDLRFVKDEVLY- 1619

  Fly   561 MPDAVVPASGVFSVKLLRAGKCGLGLSVSG-SSHGGLVISDVKMGSPAHRSGSLRSGDILLAVDQ 624
             .|..| .:|.|.  |.||.|    |...| ....|::.|.:|:      ...||||:: :..|.
  Fly  1620 -VDNTV-FNGTFG--LWRAWK----LDAMGHRKECGIIPSQMKV------EEELRSGEV-VDCDT 1669

  Fly   625 HPVQHFNVDALLKEEGRSQNPSHSSSDFT------------------------TLTIKRIVLPDF 665
            ...:..:..|......|.:|...||.|.|                        .|:.:|:.|.| 
  Fly  1670 GTARRGSTSARRSFFRRKKNQRSSSRDSTEIASFSNTQLSFFPDLGLLNDDGGALSYQRVELLD- 1733

  Fly   666 LPMSSPIYSNCPASGINLGMGMGVSTSTD-HDLYSSAYVTAGKYADC 711
            .|:..|:....|.|..     :.|..:.| .:|:....|||   .||
  Fly  1734 SPIRRPVLIIGPLSEC-----LMVRLTIDFSNLFKLCEVTA---MDC 1772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 18/114 (16%)
PDZ_signaling 183..254 CDD:238492 18/75 (24%)
PDZ_signaling 278..375 CDD:238492 19/102 (19%)
PDZ 496..>521 CDD:294084 8/35 (23%)
PDZ_signaling 571..658 CDD:238492 23/111 (21%)
PDZ_signaling 832..913 CDD:238492
PDZ_signaling 973..1055 CDD:238492
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492 21/86 (24%)
PDZ_signaling 1497..1576 CDD:238492 17/88 (19%)
SH3_DLG5 1594..1657 CDD:212794 18/77 (23%)
Guanylate_kin 1737..1904 CDD:279019 11/44 (25%)
NK <1773..1905 CDD:302627 170/827 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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