DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip and Pez

DIOPT Version :9

Sequence 1:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster
Sequence 2:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster


Alignment Length:949 Identity:181/949 - (19%)
Similarity:270/949 - (28%) Gaps:388/949 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QDQQQQQQQQQESHNNSF--------------------NGH------HH---------------- 45
            |.|||.||||..|.|.|.                    |.|      ||                
  Fly   369 QQQQQIQQQQMISSNISLATSANQMLGQSSSCLDLSNNNLHSSSGMLHHGGSNNNNNNDERERLK 433

  Fly    46 ---------PPTDTAL--------APMLSVDRAM-SPAQSEDSGLAPE----------------R 76
                     |..:||:        |...:|..|| :|..:..:|..|:                .
  Fly   434 AMLPTYRPAPDYETAVQLKYRTPSAEFHNVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMT 498

  Fly    77 GTTYATITLPRNALHLAITF--AERNDLSYPPVVGSLNPVGHAADFLAPGDRLHQIDGISTIGLS 139
            ...|..:..|..|||..|..  |:....|:|      .|:..|..:|....|:|.          
  Fly   499 AHRYPDVAQPAAALHHHINLYQAQHQPQSHP------QPMSPAQAYLELSQRMHM---------- 547

  Fly   140 NQKVMNMLCAGGSDACPAIVEIEYSLPECTVSQNSLCVTSKLAQITVERESGCLGLTLRGGADYP 204
                                 :.:..|...|::.|...|..||..|..        .|:|..:| 
  Fly   548 ---------------------MRHKAPPPYVNRLSSSSTPDLAVATPR--------PLQGFRNY- 582

  Fly   205 LIVTHVRPHGPVYKTGRIKPGDRLLRVDNVSLIGKTLAEAQQII--KCGGHVSGYTNLTIEYDVS 267
                 |....|                |.||  .:||....|.:  ..|||..   |:......:
  Fly   583 -----VSGSSP----------------DLVS--NRTLFNGGQYVALPAGGHAG---NIPTSSGAT 621

  Fly   268 VVQSVEF--SMG---PLLIEIERPMNDKLGLVLCNYTAAVPASGSGSSTPSSGEKIEESAGVFIA 327
            ::...::  .||   |.|                      |..|    |..:...|||...  |.
  Fly   622 MLHQYQYVSHMGHSQPYL----------------------PPHG----TFENLNMIEEQPS--IM 658

  Fly   328 SILPASIADRCGALSVGDQVLSIDDTMIEHTAFSPDEVMTILDTSTGRGYTQMQIMPAHALARRG 392
            |.|..|...:..|.:.|..|          |..||        |....||......||       
  Fly   659 SQLRQSAMSQAAAAAAGSVV----------TQSSP--------TLPPSGYRSSVPPPA------- 698

  Fly   393 HTTLGSPKYSFSTLESRKSSTAGRQRQRFARKSSLPL-EN---PACGTPGSTGGSMGTGGIHGSS 453
                .||........|.||:|....::.....|..|: ||   |...:.||:|.:........:|
  Fly   699 ----SSPLPPPVVASSHKSATPAPLQRSLVNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRAS 759

  Fly   454 SLGMGLGLCRAESFPVLLDCSHGAGIILSETVSGSGGSGAVAIAQIVPDSVADRSGCIQAGDRIV 518
            |:....|:     .||....:..:..:::.||:.....|.:                        
  Fly   760 SIQSAPGV-----VPVPAARNASSNNVVTVTVNSPPDDGNI------------------------ 795

  Fly   519 AINKMYSLDAAAMRQLL----EGGSSRNGASNGTPANWLELEIEFDMPDAVVPASGVFSVKLLRA 579
               |.|..|.||..:||    :.....|.|::..|          ||.....|          |.
  Fly   796 ---KKYGADRAASTELLFLEPQAPKRTNRAASAAP----------DMGATPPP----------RQ 837

  Fly   580 GKCGLGLSVSGSSHGGLVISDVKMGSPAHRSGSLRSGDILLAVDQHPVQHFNVDALLKEEGRSQN 644
            .:....|:.|         |.|.|.:||        ||.|       .|.|:...|      |.|
  Fly   838 HRSTASLNKS---------STVDMITPA--------GDTL-------QQQFSAMNL------SAN 872

  Fly   645 PSHSSSDFTTLT------------IKRIVLPDFLPMSSPIYSNCPASGINLGMGMGVSTSTDHDL 697
            .|.|:|.....|            :||....:||..     |..|....:..:|...:|      
  Fly   873 TSASTSSMFNSTLDTTSSSAASKDLKRKKRWNFLSR-----SKTPDKQKSATLGREKAT------ 926

  Fly   698 YSSAYVTAGKYADCVSLKSRTPQPDYFRVPSMDDASLQSVQLRSGSGSNGGNQAANSWSTGVNSR 762
                  |||:::. ::.|.:..|         ||.:|                 .|.||||||..
  Fly   927 ------TAGQHSK-LAAKLKLAQ---------DDLNL-----------------PNRWSTGVNKP 958

  Fly   763 SYVAPPNTQSLTTELPEEEDEQEQMYPGYE----LNRYASVDCTALP------------PPMENK 811
            ..::...::....::.:::....|::..:|    ...:|..:|..|.            |..:|:
  Fly   959 QPISGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEPKNHDPNFLPYDDNR 1023

  Fly   812 V---------YGSA-ASSSSKSSGSSLHQIIFTVRLEPK 840
            |         :|.. |||.|.:.|:.  |..:.|...|:
  Fly  1024 VRLTPCRDNRHGYVNASSISATVGTK--QRFYIVAQSPQ 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GripNP_572285.2 PDZ 82..147 CDD:294084 13/66 (20%)
PDZ_signaling 183..254 CDD:238492 14/72 (19%)
PDZ_signaling 278..375 CDD:238492 19/96 (20%)
PDZ 496..>521 CDD:294084 0/24 (0%)
PDZ_signaling 571..658 CDD:238492 20/98 (20%)
PDZ_signaling 832..913 CDD:238492 2/9 (22%)
PDZ_signaling 973..1055 CDD:238492
PezNP_001260127.1 B41 26..230 CDD:214604
FERM_N 26..93 CDD:286467
FERM_M 114..230 CDD:278785
FERM_C_PTPN14_PTPN21 225..317 CDD:270009
Y_phosphatase 1007..1243 CDD:278528 12/56 (21%)
PTPc 1009..1243 CDD:238006 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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